RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 PAX7P23759 505 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 PSMB4P28070 264 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 PGM1P36871 562 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 NDUFV1P49821 464 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 RABGGTBP53611 331 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 SARNPP82979 210 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 NME3Q13232 169 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 STX3Q13277 289 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 FASTKD1Q53R41 847 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 RBM15BQ8NDT2 890 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 APPL2Q8NEU8 664 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 WWP1Q9H0M0 922 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 SUFUQ9UMX1 484 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 RPL26L1Q9UNX3 145 aaKnown RBP11.56□□□□□ -0.56
RPAIN-212ENST00000573126 BRCA2P51587 3418 aa11.56□□□□□ -0.56
RPAIN-212ENST00000573126 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 SDR42E2A6NKP2 422 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 CAPN14A8MX76 684 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 KCNK1O00180 336 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PIRO00625 290 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 CAPN9O14815 690 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ITM2AO43736 263 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 SNNO75324 88 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 SERPINB9P50453 376 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 GTF2A2P52657 109 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PDE1CQ14123 709 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 UBAP2LQ14157 1087 aaKnown RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 SLC25A52Q3SY17 297 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 N4BP2L1Q5TBK1 243 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 CRYBG2Q8N1P7 616 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 RNF139Q8WU17 664 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ARNTL2Q8WYA1 636 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 APBB2Q92870 758 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ATXN7L3BQ96GX2 97 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 CLPTM1LQ96KA5 538 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 FAM161BQ96MY7 647 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ZNF408Q9H9D4 720 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 BATF3Q9NR55 127 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 MORF4L1Q9UBU8 362 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 GTF2IRD1Q9UHL9 959 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 FZD10Q9ULW2 581 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PLXNA1Q9UIW2 1896 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ZSWIM8A7E2V4 1837 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 DCAF8L1A6NGE4 600 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PRR5-ARHGAP8B1AHC4 643 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 GSRP00390 522 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PDHA1P08559 390 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 IGFBP6P24592 240 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ARHGAP8P85298 464 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 THOC5Q13769 683 aaKnown RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 MUM1Q2TAK8 710 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PPM1JQ5JR12 505 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 OTUD1Q5VV17 481 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 SYPL2Q5VXT5 272 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PACS1Q6VY07 963 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 STRADAQ7RTN6 431 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 B3GALNT2Q8NCR0 500 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 ADAM32Q8TC27 787 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 DNAJB3Q8WWF6 145 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PGBD4Q96DM1 585 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 AGAP3Q96P47 875 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 PRDM12Q9H4Q4 367 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 NMRK1Q9NWW6 199 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 SYBUQ9NX95 663 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 CACNG4Q9UBN1 327 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 EMCNQ9ULC0 261 aa11.55□□□□□ -0.56
RPAIN-212ENST00000573126 M0QYT0 321 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 DYNC1LI2O43237 492 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-212ENST00000573126 USP12O75317 370 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 TBX10O75333 385 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 SMIM10L2AP0DMW4 78 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 SMIM10L2BP0DMW5 78 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ERVK-10P10266 1014 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 DARSP14868 501 aaKnown RBP11.54□□□□□ -0.56
RPAIN-212ENST00000573126 MLH1P40692 756 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ACADSBP45954 432 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 PDE1BQ01064 536 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 NRG4Q8WWG1 115 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 DNAJC9Q8WXX5 260 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 STMN2Q93045 179 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 HSFY1Q96LI6 401 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 XPNPEP3Q9NQH7 507 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 THAP1Q9NVV9 213 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 STOML1Q9UBI4 398 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 MAGED2Q9UNF1 606 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-212ENST00000573126 BIRC5O15392 142 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 HUS1O60921 280 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ALDH1A2O94788 518 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 TOMM70O94826 608 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 LUC7L3O95232 432 aaKnown RBP11.54□□□□□ -0.56
RPAIN-212ENST00000573126 LMNAP02545 664 aaKnown RBP11.54□□□□□ -0.56
RPAIN-212ENST00000573126 ITGA2BP08514 1039 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 CYP2C9P11712 490 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 FDFT1P37268 417 aa11.54□□□□□ -0.56
RPAIN-212ENST00000573126 NIPAL4Q0D2K0 466 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms