RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 IQCHQ86VS3 1027 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 CRYBG2Q8N1P7 616 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 EID2Q8N6I1 236 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHMP6-203ENST00000572525 RASSF8Q8NHQ8 419 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 ANP32BQ92688 251 aaKnown RBP10.62□□□□□ -0.71
CHMP6-203ENST00000572525 BHMTQ93088 406 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 GRAMD1AQ96CP6 724 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 CCDC97Q96F63 343 aaPredicted RBP10.62□□□□□ -0.71
CHMP6-203ENST00000572525 CGRRF1Q99675 332 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 SMOQ99835 787 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 MED10Q9BTT4 135 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
CHMP6-203ENST00000572525 CIPCQ9C0C6 399 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 CPNE5Q9HCH3 593 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 OSER1Q9NX31 292 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 FZD4Q9ULV1 537 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 PLA2G4CQ9UP65 541 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 NCKAP1Q9Y2A7 1128 aa10.62□□□□□ -0.71
CHMP6-203ENST00000572525 CENPEQ02224 2701 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 LRRC72A6NJI9 287 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 MAGEC1O60732 1142 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 MT-CO3P00414 261 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 WNT1P04628 370 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 TPM2P07951 284 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 RARGP13631 454 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 NUDT1P36639 197 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
CHMP6-203ENST00000572525 NXPH1P58417 271 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 SNRPFP62306 86 aaKnown RBP10.61□□□□□ -0.71
CHMP6-203ENST00000572525 PSMD6Q15008 389 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 BMT2Q1RMZ1 405 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 HS1BP3Q53T59 392 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 SLC45A4Q5BKX6 768 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 C10orf120Q5SQS8 335 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 CDCP2Q5VXM1 449 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 UNC93AQ86WB7 457 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 CACUL1Q86Y37 369 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 CBWD2Q8IUF1 395 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 ZNF557Q8N988 423 aaPredicted RBP10.61□□□□□ -0.71
CHMP6-203ENST00000572525 SLC6A18Q96N87 628 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 RSPH9Q9H1X1 276 aaPredicted RBP10.61□□□□□ -0.71
CHMP6-203ENST00000572525 PCIF1Q9H4Z3 704 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 POLR1BQ9H9Y6 1135 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 NMUR1Q9HB89 426 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 ASCL3Q9NQ33 180 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 PRSS16Q9NQE7 514 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 THSD1Q9NS62 852 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 NXF1Q9UBU9 619 aaKnown RBP10.61□□□□□ -0.71
CHMP6-203ENST00000572525 TJP2Q9UDY2 1190 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 SUN2Q9UH99 717 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 SCN8AQ9UQD0 1980 aa10.61□□□□□ -0.71
CHMP6-203ENST00000572525 HHLA1C9JL84 531 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 GP1BAP07359 652 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 FAM200BP0CF97 657 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 TNNI1P19237 187 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 TRIM21P19474 475 aaKnown RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 GALCP54803 685 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 ZNF211Q13398 564 aaPredicted RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 TRPC3Q13507 836 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 ARID5BQ14865 1188 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 SNRNP35Q16560 246 aaKnown RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 FNDC3BQ53EP0 1204 aaKnown RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 MPPE1Q53F39 396 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 COLEC12Q5KU26 742 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 ZNF574Q6ZN55 896 aaPredicted RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 CLEC17AQ6ZS10 378 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 SV2BQ7L1I2 683 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 AHI1Q8N157 1196 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 MFSD2AQ8NA29 543 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 KDM1BQ8NB78 822 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 OR2T34Q8NGX1 318 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 DEPDC7Q96QD5 511 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 PABPC3Q9H361 631 aaKnown RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 HSPBP1Q9NZL4 362 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 CCDC39Q9UFE4 941 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 HEMK1Q9Y5R4 338 aaPredicted RBP10.6□□□□□ -0.71
CHMP6-203ENST00000572525 USP3Q9Y6I4 520 aa10.6□□□□□ -0.71
CHMP6-203ENST00000572525 A0A1W2PQH9 124 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 TLR4O00206 839 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 EIF3DO15371 548 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 CYP26A1O43174 497 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 KLK10O43240 276 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 LATO43561 262 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 BEST1O76090 585 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 LATS1O95835 1130 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 ATP5BP06576 529 aaKnown RBP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 HSP90AA1P07900 732 aaKnown RBP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 DLDP09622 509 aaKnown RBP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 RALAP11233 206 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 HOXD9P28356 352 aaPredicted RBP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 HLA-FP30511 346 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 CORO1AP31146 461 aaKnown RBP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 HARS2P49590 506 aaKnown RBP10.59□□□□□ -0.71
CHMP6-203ENST00000572525 KIF11P52732 1056 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 AP3M2P53677 418 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 MAP3K7CLP57077 242 aa10.59□□□□□ -0.71
CHMP6-203ENST00000572525 GABREP78334 506 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms