RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 RXFP2Q8WXD0 754 aa12.36□□□□□ -0.43
TRIM25-205ENST00000572021 MSANTD3Q96H12 275 aa12.36□□□□□ -0.43
TRIM25-205ENST00000572021 SELENOOQ9BVL4 669 aa12.36□□□□□ -0.43
TRIM25-205ENST00000572021 POLR3BQ9NW08 1133 aaPredicted RBP12.36□□□□□ -0.43
TRIM25-205ENST00000572021 CLEC4EQ9ULY5 219 aa12.36□□□□□ -0.43
TRIM25-205ENST00000572021 ZNF318Q5VUA4 2279 aa12.36□□□□□ -0.43
TRIM25-205ENST00000572021 TCRBV5S1A1TA0A578 114 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 TULP3O75386 442 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 APOEP02649 317 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 KRT3P12035 628 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 GBP1P32455 592 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CHKAP35790 457 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 SLC11A2P49281 568 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 RPL7AP62424 266 aaKnown RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 AMPD2Q01433 879 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 DEUP1Q05D60 604 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 GRSF1Q12849 480 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 NNTQ13423 1086 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CCINQ13939 588 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 SLC25A52Q3SY17 297 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ADGRF1Q5T601 910 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 FYB2Q5VWT5 728 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 RAP1GAP2Q684P5 730 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 PKN3Q6P5Z2 889 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ETFBKMTQ8IXQ9 262 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 FAM217AQ8IXS0 508 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 C3orf20Q8ND61 904 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 DDI1Q8WTU0 396 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 NT5C3BQ969T7 300 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CLDN23Q96B33 292 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 NELL2Q99435 816 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CHP1Q99653 195 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 DESI2Q9BSY9 194 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ANLNQ9NQW6 1124 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 MYO1AQ9UBC5 1043 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 STAP1Q9ULZ2 295 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 BZW2Q9Y6E2 419 aaKnown RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 C2CD4BA6NLJ0 364 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 KCNU1A8MYU2 1149 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 I6L893 689 aaPredicted RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 RTN2O75298 545 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ABCB4P21439 1286 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 HOXC13P31276 330 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CCR1P32246 355 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 MTAPQ13126 283 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 GAS6Q14393 721 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CCDC14Q49A88 953 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CCDC170Q8IYT3 715 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CFAP52Q8N1V2 620 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 PHTF2Q8N3S3 785 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 CPXM2Q8N436 756 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 DTWD2Q8NBA8 298 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ZNF653Q96CK0 615 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 PRICKLE1Q96MT3 831 aaPredicted RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 PNKPQ96T60 521 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 OSBPL6Q9BZF3 934 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 TRIM7Q9C029 511 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ARHGEF4Q9NR80 690 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
TRIM25-205ENST00000572021 MARK1Q9P0L2 795 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 STIM2Q9P246 746 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 DNAI1Q9UI46 699 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 STOML2Q9UJZ1 356 aa12.35□□□□□ -0.43
TRIM25-205ENST00000572021 SIGLEC16A6NMB1 481 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 K7EQS6 105 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 GFRA2O00451 464 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 NCAM2O15394 837 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 CACNG3O60359 315 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 TBL1XO60907 577 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 RNF40O75150 1001 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 KAT7O95251 611 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 NDUFA10O95299 355 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 PENKP01210 267 aaPredicted RBP12.34□□□□□ -0.43
TRIM25-205ENST00000572021 GZMAP12544 262 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
TRIM25-205ENST00000572021 SDC4P31431 198 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
TRIM25-205ENST00000572021 GSCP56915 257 aaPredicted RBP12.34□□□□□ -0.43
TRIM25-205ENST00000572021 RPS24P62847 133 aaKnown RBP12.34□□□□□ -0.43
TRIM25-205ENST00000572021 OGDHQ02218 1023 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 MAMLD1Q13495 774 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 EMC10Q5UCC4 262 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 C1orf228Q6PIY5 440 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 VPS36Q86VN1 386 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 CHSY1Q86X52 802 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 CIR1Q86X95 450 aaPredicted RBP12.34□□□□□ -0.43
TRIM25-205ENST00000572021 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
TRIM25-205ENST00000572021 LGI2Q8N0V4 545 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms