RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 DNAJB2P25686 324 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 HPDP32754 393 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-208ENST00000571043 MDH1P40925 334 aaKnown RBP17.92■□□□□ 0.46
RPAIN-208ENST00000571043 DSG1Q02413 1049 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 UBE3AQ05086 875 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 CBLBQ13191 982 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 AUHQ13825 339 aaKnown RBP17.92■□□□□ 0.46
RPAIN-208ENST00000571043 HIF1AQ16665 826 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 ANKS3Q6ZW76 656 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 SPATA2LQ8IUW3 424 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-208ENST00000571043 VPS52Q8N1B4 723 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 SLC7A14Q8TBB6 771 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 EPS8L3Q8TE67 593 aaKnown RBP17.92■□□□□ 0.46
RPAIN-208ENST00000571043 C9orf72Q96LT7 481 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 TMEM209Q96SK2 561 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 OXCT2Q9BYC2 517 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-208ENST00000571043 PIGVQ9NUD9 493 aa17.92■□□□□ 0.46
RPAIN-208ENST00000571043 A0A087WUV0 522 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-208ENST00000571043 SRRM3A6NNA2 597 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-208ENST00000571043 HACD1B0YJ81 288 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 KCNN4O15554 427 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 NCAM1P13591 858 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 GOT1P17174 413 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 RBL1P28749 1068 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 ATP5DP30049 168 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 ADRA1BP35368 520 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 CDR1P51861 262 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 ZNF135P52742 658 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-208ENST00000571043 NME3Q13232 169 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 SLC45A4Q5BKX6 768 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 PPP2R2DQ66LE6 453 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 NCBP2-AS2Q69YL0 99 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 KIAA1841Q6NSI8 718 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
RPAIN-208ENST00000571043 RNF139Q8WU17 664 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 RHOBTB2Q9BYZ6 727 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 ZCWPW1Q9H0M4 648 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 WDR6Q9NNW5 1121 aaKnown RBP17.91■□□□□ 0.46
RPAIN-208ENST00000571043 ALG13Q9NP73 1137 aaKnown RBP17.91■□□□□ 0.46
RPAIN-208ENST00000571043 SLC12A6Q9UHW9 1150 aa17.91■□□□□ 0.46
RPAIN-208ENST00000571043 E7ESA3 106 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 H3BNC9 293 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 H7C4K7 107 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 CHADO15335 359 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 LILRB3O75022 631 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 ZNF189O75820 626 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-208ENST00000571043 CTSAP10619 480 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 TSHRP16473 764 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 AMPD1P23109 780 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 GLUD2P49448 558 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 GBE1Q04446 702 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 ANKRD22Q5VYY1 191 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 PPP1R21Q6ZMI0 780 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 PYROXD2Q8N2H3 581 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 TIFAQ96CG3 184 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 QKIQ96PU8 341 aaKnown RBP eCLIP17.9■□□□□ 0.46
RPAIN-208ENST00000571043 FRMD8Q9BZ67 464 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-208ENST00000571043 MAGEB5Q9BZ81 275 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 ZBP1Q9H171 429 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 ARHGEF4Q9NR80 690 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 FBXW11Q9UKB1 542 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 BACE2Q9Y5Z0 518 aa17.9■□□□□ 0.46
RPAIN-208ENST00000571043 GCATO75600 419 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 MAGEA6P43360 314 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 HCAR3P49019 387 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 BASP1P80723 227 aaKnown RBP17.89■□□□□ 0.45
RPAIN-208ENST00000571043 SLC10A2Q12908 348 aaPredicted RBP17.89■□□□□ 0.45
RPAIN-208ENST00000571043 PDIA2Q13087 525 aaKnown RBP17.89■□□□□ 0.45
RPAIN-208ENST00000571043 KCNJ11Q14654 390 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 ARL13BQ3SXY8 428 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 CTXN3Q4LDR2 81 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 BSPRYQ5W0U4 402 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 ZNF280DQ6N043 979 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 LRRC31Q6UY01 552 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 RIBC1Q8N443 379 aaPredicted RBP17.89■□□□□ 0.45
RPAIN-208ENST00000571043 FBXO22Q8NEZ5 403 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 POF1BQ8WVV4 589 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 FUBP3Q96I24 572 aaKnown RBP eCLIP17.89■□□□□ 0.45
RPAIN-208ENST00000571043 OLFM3Q96PB7 478 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 PPCSQ9HAB8 311 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 DTLQ9NZJ0 730 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 MTRRQ9UBK8 725 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 LGALS13Q9UHV8 139 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 XPO7Q9UIA9 1087 aaKnown RBP17.89■□□□□ 0.45
RPAIN-208ENST00000571043 SSX2IPQ9Y2D8 614 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 CDH23Q9H251 3354 aa17.89■□□□□ 0.45
RPAIN-208ENST00000571043 SYNJ2BP-COX16A0A087WUM0 186 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 C5orf60A6NFR6 353 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 OR6C75A6NL08 312 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 SMIM23A6NLE4 172 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 E7EVH7 732 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 TMEM63AO94886 807 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 DNAJB1P25685 340 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 SLCO1A2P46721 670 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 CXCR3P49682 368 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 ERVFC1P60507 584 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 SEMA3BQ13214 749 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 PSMD5Q16401 504 aa17.88■□□□□ 0.45
RPAIN-208ENST00000571043 NFE2Q16621 373 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-208ENST00000571043 LONRF1Q17RB8 773 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms