RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 DAB1O75553 588 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 APOEP02649 317 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 SLC2A3P11169 496 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-204ENST00000571018 NTSR1P30989 418 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 GBP1P32455 592 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 MATKP42679 507 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-204ENST00000571018 ZC3H12AQ5D1E8 599 aaKnown RBP13.15□□□□□ -0.3
TVP23B-204ENST00000571018 NAA35Q5VZE5 725 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 EGFLAMQ63HQ2 1017 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 RNF43Q68DV7 783 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 RFWD3Q6PCD5 774 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 CACNA2D4Q7Z3S7 1137 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 LUZP1Q86V48 1076 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 XYLT1Q86Y38 959 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 GAB3Q8WWW8 586 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 CPA5Q8WXQ8 436 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 RUBCNQ92622 972 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 BTN2A3PQ96KV6 586 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 NAP1L5Q96NT1 182 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-204ENST00000571018 FAM204AQ9H8W3 233 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 POLMQ9NP87 494 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-204ENST00000571018 DDIT4Q9NX09 232 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 RRN3Q9NYV6 651 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 ATG2BQ96BY7 2078 aa13.15□□□□□ -0.3
TVP23B-204ENST00000571018 KCNU1A8MYU2 1149 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 SNPHO15079 494 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 TIMM44O43615 452 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 RPP40O75818 363 aaKnown RBP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 MOCS2O96007 188 aaPredicted RBP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 SERPINC1P01008 464 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 MMP8P22894 467 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 HLA-FP30511 346 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 CCR1P32246 355 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 SGSHP51688 502 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 TPM4P67936 248 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 NR1I3Q14994 352 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 EIF4HQ15056 248 aaKnown RBP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 C2CD6Q53TS8 623 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 MS4A13Q5J8X5 152 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 ANKS1BQ7Z6G8 1248 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 ATP6V0D2Q8N8Y2 350 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 NT5C3BQ969T7 300 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 PRICKLE1Q96MT3 831 aaPredicted RBP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 PCDHB18PQ96TA0 734 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 ACOX2Q99424 681 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 NPY6RQ99463 290 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 GABRG3Q99928 467 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 NUCKS1Q9H1E3 243 aaKnown RBP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 ELOVL2Q9NXB9 296 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 SLC12A6Q9UHW9 1150 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 XPO7Q9UIA9 1087 aaKnown RBP13.14□□□□□ -0.31
TVP23B-204ENST00000571018 RAB23Q9ULC3 237 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
TVP23B-204ENST00000571018 A0A1W2PQF6 199 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 FAM170AA1A519 330 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 M0QYT0 321 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 NPC1O15118 1278 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 TBL1XO60907 577 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 UNGP13051 313 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 HOXB2P14652 356 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 FERP16591 822 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 ABCB4P21439 1286 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 WASP42768 502 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 ARID5AQ03989 594 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 MTA1Q13330 715 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 ENPP2Q13822 863 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 E2F5Q15329 346 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 FAM102AQ5T9C2 384 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 OTUD1Q5VV17 481 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 TMEM215Q68D42 235 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 LAIR1Q6GTX8 287 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 CEP68Q76N32 757 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 ARCQ7LC44 396 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 KIAA0907Q7Z7F0 614 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 ZNF557Q8N988 423 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 HJURPQ8NCD3 748 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 MDGA1Q8NFP4 955 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 WFIKKN2Q8TEU8 576 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 UCMAQ8WVF2 138 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 BAP1Q92560 729 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 MYEOVQ96EZ4 313 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 CD248Q9HCU0 757 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
TVP23B-204ENST00000571018 THAP10Q9P2Z0 257 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-204ENST00000571018 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms