RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PLA2G6O60733 806 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PHF2O75151 1096 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FBXO24O75426 580 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FGF18O76093 207 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 KLHL18O94889 574 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 IFNB1P01574 187 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 IGHA1P01876 353 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ALBP02768 609 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ICAM1P05362 532 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 GSNP06396 782 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 RB1P06400 928 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CSH1P0DML2 217 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CSH2P0DML3 217 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 RPL9P32969 192 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 EPHX2P34913 555 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CCT6AP40227 531 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 PRCPP42785 496 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ZNF41P51814 821 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 GBX2P52951 348 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 ITGA8P53708 1063 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 BACE1P56817 501 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SLC8A3P57103 927 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 GSDMDP57764 484 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PSMA6P60900 246 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 B2MP61769 119 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PSMC6P62333 389 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 RPS26P62854 115 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 ASIC1P78348 528 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MC1RQ01726 317 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 OCRLQ01968 901 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CREB5Q02930 508 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FSTL1Q12841 308 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MAP4K2Q12851 820 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FOXC1Q12948 553 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 STK4Q13043 487 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MPP3Q13368 585 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 GIT2Q14161 759 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SQLEQ14534 574 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ACAP2Q15057 778 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CNN3Q15417 329 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 GPR162Q16538 588 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 KYNUQ16719 465 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PFKFB4Q16877 469 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CLEC16AQ2KHT3 1053 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 AAK1Q2M2I8 961 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SMU1Q2TAY7 513 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FBXO43Q4G163 708 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CTXN3Q4LDR2 81 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TMEM119Q4V9L6 283 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TCP11X2Q5H9J9 407 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FAM47CQ5HY64 1035 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PIK3R6Q5UE93 754 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 FYB2Q5VWT5 728 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 DCAF15Q66K64 600 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PDPK2PQ6A1A2 396 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 NCAPH2Q6IBW4 605 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 JMJD6Q6NYC1 403 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 PAPD4Q6PIY7 484 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 SARM1Q6SZW1 724 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PET117Q6UWS5 81 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ZNF574Q6ZN55 896 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 AGMOQ6ZNB7 445 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 LRRC69Q6ZNQ3 347 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 DYMQ7RTS9 669 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CACNA2D4Q7Z3S7 1137 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 REC114Q7Z4M0 266 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CDH24Q86UP0 819 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 STK32CQ86UX6 486 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 BPHLQ86WA6 291 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 METTL23Q86XA0 190 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CEP57Q86XR8 500 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 WDR49Q8IV35 697 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 DENND6AQ8IWF6 608 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CCDC105Q8IYK2 499 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TAGAPQ8N103 731 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 IQUBQ8NA54 791 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 KIAA0895Q8NCT3 520 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 GSTCDQ8NEC7 633 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 KIF18AQ8NI77 898 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 GRIN3AQ8TCU5 1115 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CHURC1Q8WUH1 139 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CACTINQ8WUQ7 758 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 CHTF18Q8WVB6 975 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 AUTS2Q8WXX7 1259 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 RAD54LQ92698 747 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SDCCAG3Q96C92 435 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 INTS12Q96CB8 462 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 ACSF2Q96CM8 615 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 C1GALT1C1Q96EU7 318 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 C11orf24Q96F05 449 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 GBP5Q96PP8 586 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 KCNC2Q96PR1 638 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TAAR1Q96RJ0 339 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CTAGE1Q96RT6 745 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 COQ7Q99807 217 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SH3GL2Q99962 352 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 BCL7BQ9BQE9 202 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 BPIFA3Q9BQP9 254 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SIKE1Q9BRV8 207 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TSEN34Q9BSV6 310 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms