RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SERPINB11Q96P15 392 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 ZBP1Q9H171 429 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 TLR8Q9NR97 1041 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 PCDHB12Q9Y5F1 795 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CEP290O15078 2479 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 MYO18AQ92614 2054 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 ZDHHC11BP0C7U3 371 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SRGAP2BP0DMP2 458 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 HMGA1P17096 107 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 PPM1AP35813 382 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SLC45A4Q5BKX6 768 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 C10orf120Q5SQS8 335 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 SLC39A13Q96H72 371 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CLIC5Q9NZA1 410 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 TPX2Q9ULW0 747 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 TCRBV7S3A2A0A539 114 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 BCLAF3A2AJT9 711 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 KCNU1A8MYU2 1149 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 EPHB2P29323 1055 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 NR2C2P49116 596 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 TUFMP49411 452 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 PMS2P54278 862 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 RAB33AQ14088 237 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 PAFAH1B3Q15102 231 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 BRMS1LQ5PSV4 323 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 PSRC1Q6PGN9 363 aaPredicted RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CPT1BQ92523 772 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 MRPL17Q9NRX2 175 aaKnown RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 TLR6Q9Y2C9 796 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 ANAPC1Q9H1A4 1944 aa11.29□□□□□ -0.6
PDXDC1-216ENST00000569715 H0YGN5 161 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 LILRB3O75022 631 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 HMBSP08397 361 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 PPP2R5DQ14738 602 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 C14orf80Q86SX3 495 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 RTP4Q96DX8 246 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 EPAS1Q99814 870 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 FAM129AQ9BZQ8 928 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 HS3ST4Q9Y661 456 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 TBX4P57082 545 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 MTM1Q13496 603 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 ALS2CLQ60I27 953 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 CDKL3Q8IVW4 592 aaPredicted RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 UHMK1Q8TAS1 419 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 OSBPL2Q9H1P3 480 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 ACBD3Q9H3P7 528 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 SLC4A7Q9Y6M7 1214 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 TLR5O60602 858 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 TMEM63AO94886 807 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 ARHGEF15O94989 841 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 STIP1P31948 543 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 HCAR3P49019 387 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 XRCC4Q13426 336 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 MANEALQ5VSG8 457 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 RWDD4Q6NW29 188 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 CDC42EP4Q9H3Q1 356 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 PRDM12Q9H4Q4 367 aa11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-216ENST00000569715 DOCK4Q8N1I0 1966 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 OBSL1O75147 1896 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 PRRG1O14668 218 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 TLL1O43897 1013 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 BANF1O75531 89 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 SHBGP04278 402 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 IRAK1P51617 712 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 BASP1P80723 227 aaKnown RBP11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 CAV1Q03135 178 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 TWF1Q12792 350 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 PLD1Q13393 1074 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 ZCCHC9Q8N567 271 aaKnown RBP11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 BBOF1Q8ND07 529 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 DEPDC1BQ8WUY9 529 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 HAPLN3Q96S86 360 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 GBF1Q92538 1859 aa11.27□□□□□ -0.6
PDXDC1-216ENST00000569715 SLC12A8A0AV02 714 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 CTSAP10619 480 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 PSEN1P49768 467 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 MORF4L2Q15014 288 aa11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 PRKD1Q15139 912 aaPredicted RBP11.27□□□□□ -0.61
PDXDC1-216ENST00000569715 HP1BP3Q5SSJ5 553 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms