RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	IQCD	Q96DY2	449 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	CLMN	Q96JQ2	1002 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	NUDT22	Q9BRQ3	303 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	PIMREG	Q9BSJ6	248 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	HTATIP2	Q9BUP3	242 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	ARHGAP39	Q9C0H5	1083 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	TASP1	Q9H6P5	420 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	PRDM11	Q9NQV5	511 aa		3.92	□□□□□ -1.78
UBR1-209	ENST00000569243	OR2W5	A6NFC9	320 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	IL18RAP	O95256	599 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	NGFR	P08138	427 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	AR	P10275	920 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	ST6GAL1	P15907	406 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	RHCE	P18577	417 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	ATIC	P31939	592 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	VPS41	P49754	854 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	DMWD	Q09019	674 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	GPS1	Q13098	491 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	SEMA3B	Q13214	749 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	DAG1	Q14118	895 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	PTGR1	Q14914	329 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	FAXC	Q5TGI0	409 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	TTLL5	Q6EMB2	1281 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	CYB5RL	Q6IPT4	315 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	ACSM6	Q6P461	480 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	ADGRF4	Q8IZF3	695 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	ATP11C	Q8NB49	1132 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	DNASE2B	Q8WZ79	361 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	CENPI	Q92674	756 aa	Predicted RBP	3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	COLEC11	Q9BWP8	271 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	TRIM2	Q9C040	744 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	PNPLA8	Q9NP80	782 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	PCDHA7	Q9UN72	937 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243	COG5	Q9UP83	839 aa		3.91	□□□□□ -1.78
UBR1-209	ENST00000569243		F8W8V4	182 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	UGDH	O60701	494 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	IFNA2	P01563	188 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	IGKV3-20	P01619	116 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	AKR1A1	P14550	325 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	ARRB2	P32121	409 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	P2RX3	P56373	397 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	EGR4	Q05215	589 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	GAB1	Q13480	694 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	LIPM	Q5VYY2	423 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	ZNF474	Q6S9Z5	364 aa	Predicted RBP	3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	KYAT3	Q6YP21	454 aa	Known RBP	3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	ARL14EP	Q8N8R7	260 aa	Predicted RBP	3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	ZNF479	Q96JC4	524 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	EIF2A	Q9BY44	585 aa	Known RBP	3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	CDCP1	Q9H5V8	836 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	TBC1D23	Q9NUY8	699 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	WNT16	Q9UBV4	365 aa		3.9	□□□□□ -1.79
UBR1-209	ENST00000569243	DDX20	Q9UHI6	824 aa	Known RBP	3.9	□□□□□ -1.79
UBR1-209	ENST00000569243		A0A087WZ62	844 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	GAGE12J	A6NER3	117 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	VSTM5	A8MXK1	200 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	ACOT8	O14734	319 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	IDE	P14735	1019 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	SLC8A1	P32418	973 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	ATP1A4	Q13733	1029 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	GRM3	Q14832	879 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	ASIC2	Q16515	512 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	SMTNL2	Q2TAL5	461 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	TMEM196	Q5HYL7	178 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	PPP4R4	Q6NUP7	873 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	KIAA0408	Q6ZU52	694 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	BEND5	Q7L4P6	421 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	TMEM199	Q8N511	208 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	LPAR1	Q92633	364 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	LMLN	Q96KR4	655 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	MAGEB5	Q9BZ81	275 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	RBM38	Q9H0Z9	239 aa	Known RBP	3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	METTL14	Q9HCE5	456 aa	Known RBP	3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	OBP2A	Q9NY56	170 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	PLK2	Q9NYY3	685 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	ANAPC4	Q9UJX5	808 aa		3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	FRMPD2	Q68DX3	1309 aa	Predicted RBP	3.89	□□□□□ -1.79
UBR1-209	ENST00000569243	MYL4	P12829	197 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	DRD1	P21728	446 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	MST1	P26927	711 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	MLH1	P40692	756 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	STAT6	P42226	847 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	AGTR2	P50052	363 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	C9orf50	Q5SZB4	431 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	CCDC144NL	Q6NUI1	221 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	FBXL14	Q8N1E6	418 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	TTC8	Q8TAM2	541 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	TTC17	Q96AE7	1141 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	SF3B5	Q9BWJ5	86 aa	Known RBP	3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	VPS4A	Q9UN37	437 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	PCDHB2	Q9Y5E7	798 aa		3.88	□□□□□ -1.79
UBR1-209	ENST00000569243	DPPA5	A6NC42	116 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	ZSCAN9	O15535	394 aa	Predicted RBP	3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	KLKB1	P03952	638 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	WNT1	P04628	370 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	GSTM5	P46439	218 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	RFX2	P48378	723 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	LTB	Q06643	244 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	BFSP2	Q13515	415 aa		3.87	□□□□□ -1.79
UBR1-209	ENST00000569243	KEAP1	Q14145	624 aa		3.87	□□□□□ -1.79

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