RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GOLGA6L7A0A1B0GV03 622 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 DCDC2BA2VCK2 349 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 KCNJ18B7U540 433 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 FOXN3O00409 490 aaPredicted RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 NPC1O15118 1278 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 ACSL4O60488 711 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 TSPAN3O60637 253 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 CAVIN2O95810 425 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 ERBB2P04626 1255 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 CD70P32970 193 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 CDH5P33151 784 aaPredicted RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 KCNJ12Q14500 433 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 PTPN20Q4JDL3 420 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 AASDHQ4L235 1098 aaPredicted RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 TCP11X2Q5H9J9 407 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 CT47A1Q5JQC4 288 aaPredicted RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 SPDYCQ5MJ68 293 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 FAM183BPQ6ZVS7 135 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 SLC47A2Q86VL8 602 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 SLC41A1Q8IVJ1 513 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 FAM114A1Q8IWE2 563 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 UNC45BQ8IWX7 931 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 TMEFF1Q8IYR6 380 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 C12orf50Q8NA57 414 aaPredicted RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 C1orf131Q8NDD1 294 aaKnown RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 DDX1Q92499 740 aaKnown RBP8.13□□□□□ -1.11
CDH3-209ENST00000569080 FAM149B1Q96BN6 582 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 MYO19Q96H55 970 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 SLC2A13Q96QE2 648 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 EDEM2Q9BV94 578 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 ADAM33Q9BZ11 813 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 GANQ9H2C0 597 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 TMEM245Q9H330 911 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 POPDC2Q9HBU9 364 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 TMEM74BQ9NUR3 256 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 ABCB8Q9NUT2 735 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 GGA2Q9UJY4 613 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 NFE2L3Q9Y4A8 694 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 CACNA1EQ15878 2313 aa8.13□□□□□ -1.11
CDH3-209ENST00000569080 PI4KAP42356 2102 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 ATXN2Q99700 1313 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 CHD8Q9HCK8 2581 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 F8VZ95 297 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 CDX4O14627 284 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 EPHB6O15197 1021 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 ZNF217O75362 1048 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 TRUB2O95900 331 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 IGLV3-19P01714 112 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 GLI1P08151 1106 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 PABPC1P11940 636 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 UCHL3P15374 230 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 CYP11B1P15538 503 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 ITPKAP23677 461 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 EEF1GP26641 437 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 HOXD12P35452 270 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 USP8P40818 1118 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 SLC11A2P49281 568 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 DHPSP49366 369 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 RPS24P62847 133 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 YWHAZP63104 245 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 CAMK2GQ13555 558 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 DRAP1Q14919 205 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 TPD52L1Q16890 204 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 MS4A13Q5J8X5 152 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 STPG1Q5TH74 334 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 KLHDC7AQ5VTJ3 777 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 LYSMD4Q5XG99 296 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 C11orf57Q6ZUT1 292 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 ARMCX6Q7L4S7 300 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 LPCAT2Q7L5N7 544 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 SLC26A9Q7LBE3 791 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 METTL3Q86U44 580 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 CREBRFQ8IUR6 639 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 AHI1Q8N157 1196 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 HJURPQ8NCD3 748 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 ENOX1Q8TC92 643 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 WFIKKN2Q8TEU8 576 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 CYB5D2Q8WUJ1 264 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 GOLGA1Q92805 767 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 TMA16Q96EY4 203 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 PPP1R13BQ96KQ4 1090 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 PRMT1Q99873 361 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 TRIM62Q9BVG3 475 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 CIPCQ9C0C6 399 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 HSD3B7Q9H2F3 369 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 PLCB1Q9NQ66 1216 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 ASNSD1Q9NWL6 643 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 TAB2Q9NYJ8 693 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 EVLQ9UI08 416 aaPredicted RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 PILRBQ9UKJ0 227 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 INTS6Q9UL03 887 aaKnown RBP8.12□□□□□ -1.11
CDH3-209ENST00000569080 CYP8B1Q9UNU6 501 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 GON4LQ3T8J9 2241 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 CEP295Q9C0D2 2601 aa8.12□□□□□ -1.11
CDH3-209ENST00000569080 NUMA1Q14980 2115 aa8.11□□□□□ -1.11
CDH3-209ENST00000569080 KCNU1A8MYU2 1149 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms