RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, human

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC3-215	ENST00000569007	ID4	P47928	161 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	CDK17	Q00537	523 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	LMNB2	Q03252	620 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	EIF4H	Q15056	248 aa	Known RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	SYCP1	Q15431	976 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	CSRP2	Q16527	193 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	ANO6	Q4KMQ2	910 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	MPP7	Q5T2T1	576 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	TMEM215	Q68D42	235 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	C11orf74	Q86VG3	221 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	UCMA	Q8WVF2	138 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	SORCS1	Q8WY21	1168 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	RMDN1	Q96DB5	314 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	MYEOV	Q96EZ4	313 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	DDX50	Q9BQ39	737 aa	Known RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	IRX2	Q9BZI1	471 aa	Predicted RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	NUCKS1	Q9H1E3	243 aa	Known RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	FAM204A	Q9H8W3	233 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	NLRC4	Q9NPP4	1024 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	THAP10	Q9P2Z0	257 aa	Predicted RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	XPO7	Q9UIA9	1087 aa	Known RBP	18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	ABCA7	Q8IZY2	2146 aa		18.2	■□□□□ 0.5
EDC3-215	ENST00000569007	LRRC10B	A6NIK2	292 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	GFPT2	O94808	682 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	IL12RB1	P42701	662 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	SLC6A3	Q01959	620 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	DNAH14	Q0VDD8	3507 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	CCDC6	Q16204	474 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	RNF43	Q68DV7	783 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	SLC26A9	Q7LBE3	791 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	APTX	Q7Z2E3	356 aa	Known RBP	18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	FRMD1	Q8N878	549 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	HJURP	Q8NCD3	748 aa	Predicted RBP	18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	WFDC5	Q8TCV5	224 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	EPS8L1	Q8TE68	723 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	NAT10	Q9H0A0	1025 aa	Known RBP	18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	ABCB8	Q9NUT2	735 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	DDIT4	Q9NX09	232 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	CALCOCO1	Q9P1Z2	691 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	STIM2	Q9P246	746 aa		18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.19	■□□□□ 0.5
EDC3-215	ENST00000569007	SYNJ2BP-COX16	A0A087WUM0	186 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	NPC1	O15118	1278 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	ZBTB24	O43167	697 aa	Predicted RBP	18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	TIMM44	O43615	452 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	LSM8	O95777	96 aa	Known RBP	18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	MME	P08473	750 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	ATP1A3	P13637	1013 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	NDUFV2	P19404	249 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	JAM2	P57087	298 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	RPS24	P62847	133 aa	Known RBP	18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	UBXN1	Q04323	297 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	ENPP2	Q13822	863 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	ZNF234	Q14588	700 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	MAP7D1	Q3KQU3	841 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	MS4A13	Q5J8X5	152 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	PMS2CL	Q68D20	193 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	ZDHHC17	Q8IUH5	632 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	WFIKKN2	Q8TEU8	576 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	BTN2A3P	Q96KV6	586 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	SPACA7	Q96KW9	195 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	COX16	Q9P0S2	106 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	GGA2	Q9UJY4	613 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	PCDHGA5	Q9Y5G8	931 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	RALGAPA1	Q6GYQ0	2036 aa		18.18	■□□□□ 0.5
EDC3-215	ENST00000569007	CACNA1A	O00555	2505 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	MAP3K13	O43283	966 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	DAB1	O75553	588 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	PABPC1	P11940	636 aa	Known RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	CD70	P32970	193 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	SOX5	P35711	763 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	CREB5	Q02930	508 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	ARID5A	Q03989	594 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	BYSL	Q13895	437 aa	Known RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	STARD3	Q14849	445 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	E2F5	Q15329	346 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	RSPO4	Q2I0M5	234 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	RAP1GAP2	Q684P5	730 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	PRR23C	Q6ZRP0	262 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	CHST9	Q7L1S5	443 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	ADIPOR2	Q86V24	386 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	CHSY1	Q86X52	802 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	ERICH1	Q86X53	443 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	CFAP52	Q8N1V2	620 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	ZNF397	Q8NF99	534 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	NEK11	Q8NG66	645 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	SLC20A1	Q8WUM9	679 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	C18orf8	Q96DM3	657 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	SPAG5	Q96R06	1193 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	SLC6A17	Q9H1V8	727 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	MBD1	Q9UIS9	605 aa	Predicted RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	NOCT	Q9UK39	431 aa	Known RBP	18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	DAAM1	Q9Y4D1	1078 aa		18.17	■□□□□ 0.5
EDC3-215	ENST00000569007	TYW5	A2RUC4	315 aa	Known RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms