RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TSPAN3O60637 253 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 F13A1P00488 732 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 HLA-FP30511 346 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 ACSL1P33121 698 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 TKTL1P51854 596 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 PTPRNQ16849 979 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 MPP7Q5T2T1 576 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 ADGRF1Q5T601 910 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 KIAA0907Q7Z7F0 614 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 CACUL1Q86Y37 369 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 FBXL13Q8NEE6 735 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 RNF139Q8WU17 664 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 HNRNPLLQ8WVV9 542 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 SORCS1Q8WY21 1168 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 BIRC7Q96CA5 298 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 TMA16Q96EY4 203 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 ARID3AQ99856 593 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 CISHQ9NSE2 258 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 RCOR1Q9UKL0 485 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 SNX11Q9Y5W9 270 aa16.44■□□□□ 0.22
HERPUD1-215ENST00000568676 TRABD2BA6NFA1 517 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 XPO1O14980 1071 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 RHOBTB3O94955 611 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 DLDP09622 509 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 TRIM49P0CI25 452 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 TRIM49CP0CI26 452 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 RAD23BP54727 409 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 ADAM9Q13443 819 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 CAMK2BQ13554 666 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 USP30Q70CQ3 517 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 CHST9Q7L1S5 443 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 ADAT2Q7Z6V5 191 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 TMPRSS12Q86WS5 348 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 FMNL3Q8IVF7 1028 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 SCML4Q8N228 414 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 GUF1Q8N442 669 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 SLC4A11Q8NBS3 891 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 IPO9Q96P70 1041 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 LRRC4Q9HBW1 653 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 ABCC13Q9NSE7 274 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 GGA2Q9UJY4 613 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 TPX2Q9ULW0 747 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 NCKAP1Q9Y2A7 1128 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 PCDHGA1Q9Y5H4 931 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 NBEAQ8NFP9 2946 aa16.43■□□□□ 0.22
HERPUD1-215ENST00000568676 IRAK2O43187 625 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 PABPC1P11940 636 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 HLA-EP13747 358 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 CMA1P23946 247 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 CTSKP43235 329 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 MXI1P50539 228 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 RPS14P62263 151 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 RACK1P63244 317 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 ZNF776Q68DI1 518 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 ADIPOR2Q86V24 386 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 ACE2Q9BYF1 805 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 ULBP1Q9BZM6 244 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 PRSS16Q9NQE7 514 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 ABCB8Q9NUT2 735 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 HESX1Q9UBX0 185 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 FTSJ1Q9UET6 329 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 BTBD3Q9Y2F9 522 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 ACACAQ13085 2346 aa16.42■□□□□ 0.22
HERPUD1-215ENST00000568676 VILLO15195 856 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 YKT6O15498 198 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 RNASEH1O60930 286 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 FSBPO95073 299 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 C1SP09871 688 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 C21orf59P57076 290 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 YWHAEP62258 255 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 CYP4F3Q08477 520 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 BST2Q10589 180 aaKnown RBP16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 EDRF1Q3B7T1 1238 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 BSPRYQ5W0U4 402 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 UNC45BQ8IWX7 931 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 KDM1BQ8NB78 822 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 SNX21Q969T3 373 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 LRIG1Q96JA1 1093 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 CNGB3Q9NQW8 809 aa16.41■□□□□ 0.22
HERPUD1-215ENST00000568676 GOLGA8CPA6NN73 597 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 H0Y8X5 98 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 ASLP04424 464 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 SETSIPP0DME0 302 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 PFKFB1P16118 471 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 HNF1BP35680 557 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 ST8SIA6P61647 398 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 FOXD4L6Q3SYB3 417 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 SGO2Q562F6 1265 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 NUGGCQ68CJ6 796 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 KIAA0895LQ68EN5 471 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 FOXD4L3Q6VB84 417 aaPredicted RBP16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 BHLHA9Q7RTU4 235 aa16.4■□□□□ 0.22
HERPUD1-215ENST00000568676 SIX6OS1Q8N1H7 587 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms