RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 SH3RF2Q8TEC5 729 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 NDRG1Q92597 394 aaKnown RBP11.51□□□□□ -0.57
LINC01228-201ENST00000567966 EZH1Q92800 747 aaPredicted RBP11.51□□□□□ -0.57
LINC01228-201ENST00000567966 NT5C3BQ969T7 300 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 FAM149B1Q96BN6 582 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01228-201ENST00000567966 LINC00597Q9H2U6 94 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 PARVAQ9NVD7 372 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 DLL3Q9NYJ7 618 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 TMEM59LQ9UK28 342 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 CPQQ9Y646 472 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 KIAA1549LQ6ZVL6 1849 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 OTOGLQ3ZCN5 2332 aa11.51□□□□□ -0.57
LINC01228-201ENST00000567966 EML5Q05BV3 1969 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 ZNF292O60281 2723 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 A0A087X0T9 212 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 LEFTY2O00292 366 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 PIK3R2O00459 728 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 LATS1O95835 1130 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 FAM228BP0C875 321 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 KRT3P12035 628 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 FECHP22830 423 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 GJA4P35212 333 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 EIF4A3P38919 411 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 AMPD2Q01433 879 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 SPEM2Q0P670 501 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 EFEMP1Q12805 493 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 EIF4EBP2Q13542 120 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 SIM2Q14190 667 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 SLC25A52Q3SY17 297 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 MMS22LQ6ZRQ5 1243 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 LONP2Q86WA8 852 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 OLIG1Q8TAK6 271 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 CLEC4CQ8WTT0 213 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 OSCP1Q8WVF1 389 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 PLD4Q96BZ4 506 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 C16orf45Q96MC5 204 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 SERPINB11Q96P15 392 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 DEF6Q9H4E7 631 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 ECT2Q9H8V3 914 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 NHEJ1Q9H9Q4 299 aaPredicted RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 DUS2Q9NX74 493 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 LSM7Q9UK45 103 aaKnown RBP11.5□□□□□ -0.57
LINC01228-201ENST00000567966 STAP1Q9ULZ2 295 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 USP18Q9UMW8 372 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 TLR6Q9Y2C9 796 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 WDR87Q6ZQQ6 2873 aa11.5□□□□□ -0.57
LINC01228-201ENST00000567966 GVINP1Q7Z2Y8 2422 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 SCAMP3O14828 347 aaKnown RBP11.49□□□□□ -0.57
LINC01228-201ENST00000567966 AKR1B10O60218 316 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 RNF40O75150 1001 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 DAB1O75553 588 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 ENDOD1O94919 500 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 IGLV3-25P01717 112 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 CHKAP35790 457 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 IFNAR2P48551 515 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 GRSF1Q12849 480 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC01228-201ENST00000567966 NR1H3Q13133 447 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 PUM1Q14671 1186 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC01228-201ENST00000567966 TAF5Q15542 800 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 EML3Q32P44 896 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 CCDC122Q5T0U0 273 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 FAM102AQ5T9C2 384 aaPredicted RBP11.49□□□□□ -0.57
LINC01228-201ENST00000567966 SYPL2Q5VXT5 272 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 NUGGCQ68CJ6 796 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 PLEKHA7Q6IQ23 1121 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 DGLUCYQ7Z3D6 616 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 WDR5BQ86VZ2 330 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 MIB1Q86YT6 1006 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 ADGRG2Q8IZP9 1017 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 DEFB106AQ8N104 65 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 MYRIPQ8NFW9 859 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 KIF18AQ8NI77 898 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 EDEM1Q92611 657 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 ATP2A3Q93084 1043 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 CFAP97Q9P2B7 532 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 SLC12A6Q9UHW9 1150 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 LCMT1Q9UIC8 334 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 STOML2Q9UJZ1 356 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 RAB23Q9ULC3 237 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 INTUQ9ULD6 942 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
LINC01228-201ENST00000567966 SH3BP1Q9Y3L3 701 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms