RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 DOCK3Q8IZD9 2030 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 A0A1W2PRX2 142 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 LRRC53A6NM62 1247 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 KBTBD13C9JR72 458 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 PDXKO00764 312 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ADAMTS3O15072 1205 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 EIF3DO15371 548 aaKnown RBP eCLIP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 DAPK3O43293 454 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ZEB2O60315 1214 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 PLA2G6O60733 806 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 TBCAO75347 108 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FLOT1O75955 427 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FSBPO95073 299 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ATP1A1P05023 1023 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 PFKMP08237 780 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 RHOXF2BP0C7M4 288 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 VSIG10L2P0DP72 767 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 CYP11B2P19099 503 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ACO1P21399 889 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 MSX2P35548 267 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 SNRPFP62306 86 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 VSNL1P62760 191 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 SETQ01105 290 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FPGSQ05932 587 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FOXL1Q12952 345 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ALCAMQ13740 583 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 GRM7Q14831 915 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 SLC18A3Q16572 532 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 KNOP1Q1ED39 458 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 QRICH1Q2TAL8 776 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ASTE1Q2TB18 679 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ATP13A4Q4VNC1 1196 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 HERC4Q5GLZ8 1057 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 GBP6Q6ZN66 633 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 Q6ZSN1 163 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FRMD7Q6ZUT3 714 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 MIGA2Q7L4E1 593 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 RRAGAQ7L523 313 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 GPBP1Q86WP2 473 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 CXorf67Q86X51 503 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 SYCE1Q8N0S2 351 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 SAMD3Q8N6K7 520 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ANKRD53Q8N9V6 530 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 GPRC5AQ8NFJ5 357 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 PPP1R14CQ8TAE6 165 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 TMEM174Q8WUU8 243 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 LMBR1Q8WVP7 490 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 CRYGNQ8WXF5 182 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 HAS1Q92839 578 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 DNAJC19Q96DA6 116 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 PNKPQ96T60 521 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 RHOXF2Q9BQY4 288 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 CRACR2AQ9BSW2 395 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 WDR11Q9BZH6 1224 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FAM107BQ9H098 131 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 MTIF3Q9H2K0 278 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 IFT22Q9H7X7 185 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 AGO3Q9H9G7 860 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 TUFT1Q9NNX1 390 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 OLFML3Q9NRN5 406 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 FAM207AQ9NSI2 230 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 TYW1Q9NV66 732 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ARMCX3Q9UH62 379 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 APOBEC2Q9Y235 224 aaKnown RBP5.66□□□□□ -1.5
CAPN3-217ENST00000567817 ATP11BQ9Y2G3 1177 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 PTPRFP10586 1907 aa5.66□□□□□ -1.5
CAPN3-217ENST00000567817 LOC285556D6RIA3 1793 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 FRMPD3Q5JV73 1810 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 A0A0A6YYK5 440 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 MACROD2A1Z1Q3 448 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 GOLGA8KD6RF30 607 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 F5H6K3 240 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 PI4K2BG5E9Z4 385 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 KIAA0355O15063 1070 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 MTSS1O43312 755 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 KDM1AO60341 852 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SEC31AO94979 1220 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 PCDH8O95206 1070 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 AFPP02771 609 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 JUNP05412 331 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 EPB41P11171 864 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 EEF2P13639 858 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 HNRNPLP14866 589 aaKnown RBP eCLIP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 CYP2B6P20813 491 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 NR2F2P24468 414 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 PRKCIP41743 596 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 GPR15P49685 360 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 CACNB3P54284 484 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 SLC12A3P55017 1021 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 MANFP55145 182 aaKnown RBP5.65□□□□□ -1.5
CAPN3-217ENST00000567817 TNNC1P63316 161 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 KLRC3Q07444 240 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 PPFIA1Q13136 1202 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 PPP2R5AQ15172 486 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 ASIC2Q16515 512 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 ABCB5Q2M3G0 1257 aa5.65□□□□□ -1.5
CAPN3-217ENST00000567817 TDRD12Q587J7 1177 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms