RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FBXO21O94952 628 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 IGLV3-27P01718 113 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 ATP5BP06576 529 aaKnown RBP15.62■□□□□ 0.09
RNF40-209ENST00000566703 LCP1P13796 627 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 SLC11A2P49281 568 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 ZBTB16Q05516 673 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 NUGGCQ68CJ6 796 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 TMEM270Q6UE05 265 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 IL27RAQ6UWB1 636 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 CHST9Q7L1S5 443 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 ADIPOR2Q86V24 386 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 AHI1Q8N157 1196 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 SORCS1Q8WY21 1168 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 SUN2Q9UH99 717 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 ZMIZ1Q9ULJ6 1067 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.62■□□□□ 0.09
RNF40-209ENST00000566703 PCDHB4Q9Y5E5 795 aa15.62■□□□□ 0.09
RNF40-209ENST00000566703 KMT2BQ9UMN6 2715 aaPredicted RBP15.61■□□□□ 0.09
RNF40-209ENST00000566703 CEP192Q8TEP8 1941 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 RNF225M0QZC1 329 aaPredicted RBP15.61■□□□□ 0.09
RNF40-209ENST00000566703 BCAT2O15382 392 aaPredicted RBP15.61■□□□□ 0.09
RNF40-209ENST00000566703 GABBR2O75899 941 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 ZNF883P0CG24 379 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
RNF40-209ENST00000566703 GRIK2Q13002 908 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 TRIP6Q15654 476 aaKnown RBP15.61■□□□□ 0.09
RNF40-209ENST00000566703 PIK3R6Q5UE93 754 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 DCAF12L1Q5VU92 463 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 PMF1Q6P1K2 205 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 OR2I1PQ8NGU4 316 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 LMO3Q8TAP4 145 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 GOLGA1Q92805 767 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 DDX50Q9BQ39 737 aaKnown RBP15.61■□□□□ 0.09
RNF40-209ENST00000566703 GGA2Q9UJY4 613 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 PCDHB9Q9Y5E1 797 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 PCDH15Q96QU1 1955 aa15.61■□□□□ 0.09
RNF40-209ENST00000566703 MAP1BP46821 2468 aaKnown RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 HYAL3O43820 417 aaPredicted RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 SH3BP5O60239 455 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 ACSL4O60488 711 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 LTFP02788 710 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 DLDP09622 509 aaKnown RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 POLR2EP19388 210 aaKnown RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 RPL34P49207 117 aaKnown RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 TBX4P57082 545 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 GCNT1Q02742 428 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 BECN1Q14457 450 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 CCDC40Q4G0X9 1142 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 FNDC3BQ53EP0 1204 aaKnown RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 MBLAC2Q68D91 279 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 TTI2Q6NXR4 508 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 BEND5Q7L4P6 421 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 RAB44Q7Z6P3 723 aaPredicted RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 GLRX5Q86SX6 157 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 PPM1KQ8N3J5 372 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 EHBP1Q8NDI1 1231 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 C1orf216Q8TAB5 229 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 ERCC4Q92889 916 aaPredicted RBP15.6■□□□□ 0.09
RNF40-209ENST00000566703 LHX5Q9H2C1 402 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 OSGEPQ9NPF4 335 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 ABCB8Q9NUT2 735 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 MAN1B1Q9UKM7 699 aa15.6■□□□□ 0.09
RNF40-209ENST00000566703 BICDL2A1A5D9 508 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 SART1O43290 800 aaKnown RBP15.59■□□□□ 0.09
RNF40-209ENST00000566703 MSI1O43347 362 aaKnown RBP15.59■□□□□ 0.09
RNF40-209ENST00000566703 CER1O95813 267 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 GNA14O95837 355 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 HLA-EP13747 358 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
RNF40-209ENST00000566703 ACADSBP45954 432 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 RGS7P49802 495 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 FAM193AP78312 1265 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 NNTQ13423 1086 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 PTPRNQ16849 979 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 NAXDQ8IW45 347 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 ZCCHC9Q8N567 271 aaKnown RBP15.59■□□□□ 0.09
RNF40-209ENST00000566703 FIBINQ8TAL6 211 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 ADAMTS14Q8WXS8 1223 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 TTC17Q96AE7 1141 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 ZSWIM1Q9BR11 485 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 MIR1-1HGQ9H1L0 117 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 PRSS16Q9NQE7 514 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 SCML1Q9UN30 329 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 CNTN6Q9UQ52 1028 aa15.59■□□□□ 0.09
RNF40-209ENST00000566703 PPP1R3GB7ZBB8 358 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 M0QYV0 167 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 TBL1XO60907 577 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 ASLP04424 464 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 BRD2P25440 801 aaKnown RBP15.58■□□□□ 0.08
RNF40-209ENST00000566703 MATKP42679 507 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.08
RNF40-209ENST00000566703 RPS14P62263 151 aaKnown RBP15.58■□□□□ 0.08
RNF40-209ENST00000566703 KCNH2Q12809 1159 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 SFSWAPQ12872 951 aaKnown RBP15.58■□□□□ 0.08
RNF40-209ENST00000566703 MEA1Q16626 185 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 FAM133BQ5BKY9 247 aaKnown RBP15.58■□□□□ 0.08
RNF40-209ENST00000566703 ISM2Q6H9L7 571 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 DBX2Q6ZNG2 339 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 CHCHD4Q8N4Q1 142 aa15.58■□□□□ 0.08
RNF40-209ENST00000566703 KDM1BQ8NB78 822 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms