RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, human

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HACD3-208	ENST00000566239	CHD8	Q9HCK8	2581 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	TYW5	A2RUC4	315 aa	Known RBP	13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	IRAK2	O43187	625 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	IGLV3-27	P01718	113 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	AFP	P02771	609 aa	Known RBP	13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	BMP6	P22004	513 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	PRKCH	P24723	683 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	HLA-F	P30511	346 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	TPMT	P51580	245 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	MARS	P56192	900 aa	Known RBP	13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	TBX4	P57082	545 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	RING1	Q06587	406 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	SEMA3B	Q13214	749 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	MPP7	Q5T2T1	576 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	TMEM215	Q68D42	235 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	CHST9	Q7L1S5	443 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	ARHGEF19	Q8IW93	802 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	SORCS1	Q8WY21	1168 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	DDX50	Q9BQ39	737 aa	Known RBP	13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	ZSWIM1	Q9BR11	485 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	TRIM62	Q9BVG3	475 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	NUP58	Q9BVL2	599 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	GPR174	Q9BXC1	333 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	SRRT	Q9BXP5	876 aa	Known RBP	13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	MIS12	Q9H081	205 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	FSCN3	Q9NQT6	498 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	ABCB8	Q9NUT2	735 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	GGA2	Q9UJY4	613 aa		13.89	□□□□□ -0.19
HACD3-208	ENST00000566239	EPG5	Q9HCE0	2579 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239		A0A1B0GTW7	788 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	KCNJ18	B7U540	433 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	MED7	O43513	233 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	ACSL4	O60488	711 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	TBL1X	O60907	577 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	KRT37	O76014	449 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	IGLV3-19	P01714	112 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	ATP5B	P06576	529 aa	Known RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	PABPC1	P11940	636 aa	Known RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	KRT5	P13647	590 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	RDX	P35241	583 aa	Known RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	ACADSB	P45954	432 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	COPA	P53621	1224 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	STX17	P56962	302 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	CAMK2G	Q13555	558 aa	Predicted RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	HNRNPD	Q14103	355 aa	Known RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	PIK3R6	Q5UE93	754 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	PIP4P1	Q86T03	277 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	CACUL1	Q86Y37	369 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	OR2T3	Q8NH03	318 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	CLEC4C	Q8WTT0	213 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	AZIN2	Q96A70	460 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	FAM81B	Q96LP2	452 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	SERPINB11	Q96P15	392 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	ZDHHC5	Q9C0B5	715 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	INTS2	Q9H0H0	1204 aa	Known RBP	13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	FBRS	Q9HAH7	460 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	ST7	Q9NRC1	585 aa		13.88	□□□□□ -0.19
HACD3-208	ENST00000566239	GABBR2	O75899	941 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	HLA-E	P13747	358 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	POLR2E	P19388	210 aa	Known RBP	13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	MAOB	P27338	520 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	SLC14A1	Q13336	389 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	NNT	Q13423	1086 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	DCAF12L1	Q5VU92	463 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	MBLAC2	Q68D91	279 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	RFWD3	Q6PCD5	774 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	ENOSF1	Q7L5Y1	443 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	ADIPOR2	Q86V24	386 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	SCUBE3	Q8IX30	993 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	HJURP	Q8NCD3	748 aa	Predicted RBP	13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	CYB5D2	Q8WUJ1	264 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	DNASE2B	Q8WZ79	361 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	FAM149B1	Q96BN6	582 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	MIR1-1HG	Q9H1L0	117 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	PCED1A	Q9H1Q7	454 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	LHX5	Q9H2C1	402 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	TMEM245	Q9H330	911 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	DNAAF2	Q9NVR5	837 aa	Known RBP	13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	CNTN6	Q9UQ52	1028 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	TLR6	Q9Y2C9	796 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	PLXNA2	O75051	1894 aa		13.87	□□□□□ -0.19
HACD3-208	ENST00000566239	GOLGA6L7	A0A1B0GV03	622 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	METTL12	A8MUP2	240 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	CAPN9	O14815	690 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	GADD45B	O75293	160 aa	Predicted RBP	13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	CALCA	P01258	141 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	PROS1	P07225	676 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	DLD	P09622	509 aa	Known RBP	13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	SLC6A4	P31645	630 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	GPD2	P43304	727 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	SGSH	P51688	502 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	SIM1	P81133	766 aa	Predicted RBP	13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	MEA1	Q16626	185 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	FAM133B	Q5BKY9	247 aa	Known RBP	13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	MFN1	Q8IWA4	741 aa		13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	ZCCHC9	Q8N567	271 aa	Known RBP	13.86	□□□□□ -0.19
HACD3-208	ENST00000566239	OR2I1P	Q8NGU4	316 aa		13.86	□□□□□ -0.19

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