RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ANO9A1A5B4 782 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 HMX2A2RU54 273 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TRABD2BA6NFA1 517 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 LRRC10BA6NIK2 292 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 PRR19A6NJB7 356 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 PIRO00625 290 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 IKBKBO14920 756 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 EREGO14944 169 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 EPHB6O15197 1021 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 GSC2O15499 205 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 SH3BP5O60239 455 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 PHACTR2O75167 634 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 PAPSS2O95340 614 aaPredicted RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 SEC24AO95486 1093 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 EGFP01133 1207 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 THP07101 528 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TNNI1P19237 187 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 COPB1P53618 953 aaKnown RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CDH8P55286 799 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 SNRPFP62306 86 aaKnown RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 MYL5Q02045 173 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 GOLGA8FQ08AF8 430 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 GOLGA8DPQ0D2H9 430 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 LRMPQ12912 555 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 BFSP1Q12934 665 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 STIM1Q13586 685 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 MYBPC2Q14324 1141 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 ELF2Q15723 593 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC142Q17RM4 750 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 DUOXA2Q1HG44 320 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC40Q4G0X9 1142 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 C9orf57Q5W0N0 161 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 FSTL4Q6MZW2 842 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TRAPPC11Q7Z392 1133 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 PIP4P1Q86T03 277 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 ARHGEF19Q8IW93 802 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 MFSD6LQ8IWD5 586 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TMEFF1Q8IYR6 380 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 UBASH3BQ8TF42 649 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TSG101Q99816 390 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 BPIFA3Q9BQP9 254 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 ADPGKQ9BRR6 497 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TUBGCP2Q9BSJ2 902 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 IER2Q9BTL4 223 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TTPALQ9BTX7 342 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CEP41Q9BYV8 373 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 ADAM19Q9H013 955 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 SDCBP2Q9H190 292 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 XYLT2Q9H1B5 865 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 THAP9Q9H5L6 903 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 SLITRK6Q9H5Y7 841 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CLMPQ9H6B4 373 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CGNQ9P2M7 1197 aaKnown RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 LIMA1Q9UHB6 759 aaKnown RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 AGAP1Q9UPQ3 857 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 FNDC3AQ9Y2H6 1198 aaKnown RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 FRMD4BQ9Y2L6 1034 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TIMM13Q9Y5L4 95 aaPredicted RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CDY1Q9Y6F8 540 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 MUC22E2RYF6 1773 aaPredicted RBP6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CKAP5Q14008 2032 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 CREBBPQ92793 2442 aa6.54□□□□□ -1.36
UBFD1-204ENST00000565634 TMEM131Q92545 1883 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 CFAP46Q8IYW2 2715 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 BICDL2A1A5D9 508 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 MYBPHLA2RUH7 354 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 OTOL1A6NHN0 477 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 NOL4O94818 638 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 LDHAP00338 332 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 HLA-DRAP01903 254 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 LRG1P02750 347 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 ITGB3P05106 788 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 CFIP05156 583 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 PNMA6AP0CW24 399 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 EPB41P11171 864 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 POLR2BP30876 1174 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 HOXA6P31267 233 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 RDXP35241 583 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 MTIF2P46199 727 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 FMO5P49326 533 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 ST13P50502 369 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 RAB27AP51159 221 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 CFHR1Q03591 330 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 NR1I3Q14994 352 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 TMEM132DQ14C87 1099 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 TRIP6Q15654 476 aaKnown RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 UPP1Q16831 310 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 TPD52L1Q16890 204 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 ZACNQ401N2 412 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 CCDC157Q569K6 752 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 DCAF17Q5H9S7 520 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 CT47A1Q5JQC4 288 aaPredicted RBP6.53□□□□□ -1.36
UBFD1-204ENST00000565634 TCERG1LQ5VWI1 586 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 FOXR2Q6PJQ5 311 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 PCSK4Q6UW60 755 aa6.53□□□□□ -1.36
UBFD1-204ENST00000565634 OSTM1Q86WC4 334 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms