RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TPMTP51580 245 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 ST3GAL2Q16842 350 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 PTPRNQ16849 979 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 CHST9Q7L1S5 443 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 KIAA0907Q7Z7F0 614 aaPredicted RBP24.72■■□□□ 1.55
RAB40C-209ENST00000565511 PIP4P1Q86T03 277 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 METTL3Q86U44 580 aaKnown RBP24.72■■□□□ 1.55
RAB40C-209ENST00000565511 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.72■■□□□ 1.551e-6■■■□□ 14.6
RAB40C-209ENST00000565511 DQX1Q8TE96 717 aaKnown RBP24.72■■□□□ 1.55
RAB40C-209ENST00000565511 TMA16Q96EY4 203 aaKnown RBP24.72■■□□□ 1.55
RAB40C-209ENST00000565511 FCRL2Q96LA5 508 aaPredicted RBP24.72■■□□□ 1.55
RAB40C-209ENST00000565511 HSFY1Q96LI6 401 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 ITM2CQ9NQX7 267 aa24.72■■□□□ 1.55
RAB40C-209ENST00000565511 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.72■■□□□ 1.55
RAB40C-209ENST00000565511 NPC1O15118 1278 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 NDUFS2O75306 463 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 EPHX1P07099 455 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 FOXC1Q12948 553 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 SEMA3BQ13214 749 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 STILQ15468 1287 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 PIK3R6Q5UE93 754 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 SERPINA13PQ6UXR4 307 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 CEP76Q8TAP6 659 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 ADAM32Q8TC27 787 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 SIPA1Q96FS4 1042 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 LMLNQ96KR4 655 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 CRACR2AQ9BSW2 395 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 GPR174Q9BXC1 333 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 TMEM245Q9H330 911 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 TJP2Q9UDY2 1190 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 GGA2Q9UJY4 613 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 NAALADL1Q9UQQ1 740 aa24.71■■□□□ 1.55
RAB40C-209ENST00000565511 ACSL4O60488 711 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 SYNCRIPO60506 623 aaKnown RBP24.7■■□□□ 1.54
RAB40C-209ENST00000565511 TBL1XO60907 577 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 PABPC1P11940 636 aaKnown RBP24.7■■□□□ 1.54
RAB40C-209ENST00000565511 KRT5P13647 590 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 CEACAM1P13688 526 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 TBX4P57082 545 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 GFPT1Q06210 699 aaPredicted RBP24.7■■□□□ 1.54
RAB40C-209ENST00000565511 CETN1Q12798 172 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 SCUBE3Q8IX30 993 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 RGL4Q8IZJ4 473 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 MINDY1Q8N5J2 469 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 MTG2Q9H4K7 406 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 UBE2TQ9NPD8 197 aaPredicted RBP24.7■■□□□ 1.54
RAB40C-209ENST00000565511 XPO7Q9UIA9 1087 aaKnown RBP24.7■■□□□ 1.54
RAB40C-209ENST00000565511 SLCO1B1Q9Y6L6 691 aa24.7■■□□□ 1.54
RAB40C-209ENST00000565511 NYNRINQ9P2P1 1898 aaKnown RBP24.69■■□□□ 1.54
RAB40C-209ENST00000565511 SPAARA0A1B0GVQ0 90 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 ARHGAP33O14559 1287 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 FAM193AP78312 1265 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 PITX1P78337 314 aaPredicted RBP24.69■■□□□ 1.54
RAB40C-209ENST00000565511 CAMK2GQ13555 558 aaPredicted RBP24.69■■□□□ 1.54
RAB40C-209ENST00000565511 CAMK4Q16566 473 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 FNDC3BQ53EP0 1204 aaKnown RBP24.69■■□□□ 1.54
RAB40C-209ENST00000565511 SYPL2Q5VXT5 272 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 TAC4Q86UU9 113 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 WFIKKN2Q8TEU8 576 aa24.69■■□□□ 1.54
RAB40C-209ENST00000565511 NUCKS1Q9H1E3 243 aaKnown RBP24.69■■□□□ 1.54
RAB40C-209ENST00000565511 AJAP1Q9UKB5 411 aaPredicted RBP24.69■■□□□ 1.54
RAB40C-209ENST00000565511 KNL1Q8NG31 2342 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 BECN2A8MW95 431 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 FBXO21O94952 628 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 GNA14O95837 355 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 IGLV3-19P01714 112 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 RPS24P62847 133 aaKnown RBP24.68■■□□□ 1.54
RAB40C-209ENST00000565511 RING1Q06587 406 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 MBLAC2Q68D91 279 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 FAM124AQ86V42 546 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 IRF2BP1Q8IU81 584 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 PRCCQ92733 491 aaPredicted RBP24.68■■□□□ 1.54
RAB40C-209ENST00000565511 SLC39A13Q96H72 371 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 SLC4A5Q9BY07 1137 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 ST7Q9NRC1 585 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 STIM2Q9P246 746 aa24.68■■□□□ 1.54
RAB40C-209ENST00000565511 INTS6Q9UL03 887 aaKnown RBP24.68■■□□□ 1.54
RAB40C-209ENST00000565511 PAPSS1O43252 624 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-209ENST00000565511 TIMM44O43615 452 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 GJB3O75712 270 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 CD59P13987 128 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 SLC9A1P19634 815 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 ZNF445P59923 1031 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 PLEKHG6Q3KR16 790 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 NUGGCQ68CJ6 796 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 ZCCHC9Q8N567 271 aaKnown RBP24.67■■□□□ 1.54
RAB40C-209ENST00000565511 OR2T3Q8NH03 318 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 DNASE2BQ8WZ79 361 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 MYO19Q96H55 970 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 KIAA1468Q9P260 1216 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 ZFHX4Q86UP3 3567 aa24.67■■□□□ 1.54
RAB40C-209ENST00000565511 MEI4A8MW99 385 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 E5RJQ4 531 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 LETM1O95202 739 aaPredicted RBP24.66■■□□□ 1.54
RAB40C-209ENST00000565511 BNC1Q01954 994 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 GRIK2Q13002 908 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 TAF5Q15542 800 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 DCAF12L1Q5VU92 463 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 TRIM65Q6PJ69 517 aa24.66■■□□□ 1.54
RAB40C-209ENST00000565511 MMS22LQ6ZRQ5 1243 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms