RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ZNF487B1APH4 448 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 CLDN5O00501 218 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 STK25O00506 426 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 NDC80O14777 642 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 CAPN9O14815 690 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 TRIM66O15016 1216 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 ZBED1O96006 694 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 LRG1P02750 347 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 MYL4P12829 197 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 CPB1P15086 417 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 PTPN2P17706 415 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 ATF6P18850 670 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 TARSP26639 723 aaKnown RBP10.12□□□□□ -0.79
UBFD1-203ENST00000564106 MIPP30301 263 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 GPR15P49685 360 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 EPHA5P54756 1037 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 DAOAP59103 153 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 VSNL1P62760 191 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 MLF2Q15773 248 aaPredicted RBP10.12□□□□□ -0.79
UBFD1-203ENST00000564106 CCNG2Q16589 344 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 SLC25A52Q3SY17 297 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 SLC44A4Q53GD3 710 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 EMBQ6PCB8 327 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 CCDC137Q6PK04 289 aaKnown RBP10.12□□□□□ -0.79
UBFD1-203ENST00000564106 SPOCD1Q6ZMY3 1216 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 GAREM2Q75VX8 874 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 BEND5Q7L4P6 421 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 RIN3Q8TB24 985 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 SPPL2BQ8TCT7 592 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 FAM172AQ8WUF8 416 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 NXPE3Q969Y0 559 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 MAGOHBQ96A72 148 aaKnown RBP10.12□□□□□ -0.79
UBFD1-203ENST00000564106 CEP295NLQ96MC4 621 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 ASB16Q96NS5 453 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 SMOQ99835 787 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 LPIN3Q9BQK8 851 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 FAM114A2Q9NRY5 505 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 PCDHB5Q9Y5E4 795 aa10.12□□□□□ -0.79
UBFD1-203ENST00000564106 hCG_1818297A0A087WSY0 165 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 A0A1W2PRU2 124 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 ARNTLO00327 626 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 PIK3R2O00459 728 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 RAD51CO43502 376 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 ECI2O75521 394 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 ECEL1O95672 775 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 TRUB2O95900 331 aaKnown RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 F9P00740 461 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 LTFP02788 710 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 SP9P0CG40 484 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 RALAP11233 206 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 BDNFP23560 247 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 MAGEA11P43364 429 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 SOX9P48436 509 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CLCN6P51797 869 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 NUBP1P53384 320 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 KLF1Q13351 362 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 TFDP2Q14188 446 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CDO1Q16878 200 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CCDC14Q49A88 953 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 TPGS2Q68CL5 300 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 TSSK4Q6SA08 328 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 TPRG1Q6ZUI0 275 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CPNE8Q86YQ8 564 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 PRELID2Q8N945 189 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 KCTD6Q8NC69 237 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CCHCR1Q8TD31 782 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CENPIQ92674 756 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 RNF25Q96BH1 459 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 PIWIL1Q96J94 861 aaKnown RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CFAP57Q96MR6 1250 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 SLC2A13Q96QE2 648 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 ULBP1Q9BZM6 244 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 SMG9Q9H0W8 520 aaKnown RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 ZWILCHQ9H900 591 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 IL21Q9HBE4 155 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 EPB41L5Q9HCM4 733 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 LTB4R2Q9NPC1 389 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 C2orf42Q9NWW7 574 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 RCOR3Q9P2K3 495 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 AMACRQ9UHK6 382 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 SIT1Q9Y3P8 196 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 ZFP37Q9Y6Q3 630 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-203ENST00000564106 CACNA1AO00555 2505 aa10.11□□□□□ -0.79
UBFD1-203ENST00000564106 GREB1Q4ZG55 1949 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 KANSL1LA0AUZ9 987 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 HHLA1C9JL84 531 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 GRAP2O75791 330 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 ZNF189O75820 626 aaPredicted RBP10.1□□□□□ -0.79
UBFD1-203ENST00000564106 GABBR2O75899 941 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 BEST1O76090 585 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 ENDOD1O94919 500 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 PRAMEF12O95522 483 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 RARAP10276 462 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 KDELR1P24390 212 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 ELF1P32519 619 aa10.1□□□□□ -0.79
UBFD1-203ENST00000564106 RDXP35241 583 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms