RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CMC1Q7Z7K0 106 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 CCDC60Q8IWA6 550 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ZNF555Q8NEP9 628 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 BEST2Q8NFU1 509 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
COMMD4-209ENST00000564068 AAASQ9NRG9 546 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 NCKIPSDQ9NZQ3 722 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 PSMD13Q9UNM6 376 aa12.93□□□□□ -0.34
COMMD4-209ENST00000564068 SIN3BO75182 1162 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 PRKAA1Q13131 559 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 BFSP2Q13515 415 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 MXD4Q14582 209 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 UTS2BQ765I0 119 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 DHFR2Q86XF0 187 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 SPATA33Q96N06 139 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 SLC4A5Q9BY07 1137 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 MRPS26Q9BYN8 205 aaKnown RBP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 GPAMQ9HCL2 828 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 ZNF70Q9UC06 446 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 APOA1P02647 267 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 APOA4P06727 396 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CLK2P49760 499 aaKnown RBP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CCR3P51677 355 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 GDF10P55107 478 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CSHL1Q14406 222 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 ARCQ7LC44 396 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 HEATR4Q86WZ0 1026 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 MYO1HQ8N1T3 1032 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 SEPT1Q8WYJ6 367 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CAMKK2Q96RR4 588 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 BRD8Q9H0E9 1235 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 C6orf203Q9P0P8 240 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CHADO15335 359 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CXCL8P10145 99 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 NAMPTP43490 491 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 INPP1P49441 399 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 CLK1P49759 484 aaKnown RBP12.92□□□□□ -0.34
COMMD4-209ENST00000564068 TMEM176AQ96HP8 235 aa12.92□□□□□ -0.34
COMMD4-209ENST00000564068 RGSL1A5PLK6 1076 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 SIGLEC16A6NMB1 481 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 ZNF839A8K0R7 811 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MRASO14807 208 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MTA2O94776 668 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MMP8P22894 467 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 NAA20P61599 178 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 DLG1Q12959 904 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 GPR107Q5VW38 600 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 ASRGL1Q7L266 308 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 PPHLN1Q8NEY8 458 aaKnown RBP12.91□□□□□ -0.34
COMMD4-209ENST00000564068 SLC7A14Q8TBB6 771 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 RNF139Q8WU17 664 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MYH2Q9UKX2 1941 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 ATP5BP06576 529 aaKnown RBP12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CD48P09326 243 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 VDRP11473 427 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 FASP25445 335 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 FASTKQ14296 549 aaKnown RBP12.91□□□□□ -0.34
COMMD4-209ENST00000564068 PERM1Q5SV97 790 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 NKD2Q969F2 451 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-209ENST00000564068 ERLEC1Q96DZ1 483 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 PLGRKTQ9HBL7 147 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CROTQ9UKG9 612 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 POMPQ9Y244 141 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 A0A1B0GVG6 124 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 E5RJQ4 531 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MAFGO15525 162 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MYL4P12829 197 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CCDC130P13994 396 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 TCF4P15884 667 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 PTPN7P35236 360 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CDKN2BP42772 138 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 NUMBP49757 651 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 LPIN1Q14693 890 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 TAF5Q15542 800 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 UGCGQ16739 394 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CCDC153Q494R4 210 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-209ENST00000564068 WDR49Q8IV35 697 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 KBTBD2Q8IY47 623 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 FAM47BQ8NA70 645 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 FAM151AQ8WW52 585 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 HTR3CQ8WXA8 447 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 CCDC28BQ9BUN5 200 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 EPB41L4BQ9H329 900 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 SCHIP1Q9P0W5 487 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-209ENST00000564068 VANGL2Q9ULK5 521 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 MYH15Q9Y2K3 1946 aa12.91□□□□□ -0.34
COMMD4-209ENST00000564068 ADGRA2Q96PE1 1338 aa12.9□□□□□ -0.34
COMMD4-209ENST00000564068 A6NHS1 94 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms