RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ANLNQ9NQW6 1124 aa13.38□□□□□ -0.27
SPG7-209ENST00000564047 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.38□□□□□ -0.27
SPG7-209ENST00000564047 SLC12A6Q9UHW9 1150 aa13.38□□□□□ -0.27
SPG7-209ENST00000564047 ARHGAP26Q9UNA1 814 aa13.38□□□□□ -0.27
SPG7-209ENST00000564047 CPQQ9Y646 472 aa13.38□□□□□ -0.27
SPG7-209ENST00000564047 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
SPG7-209ENST00000564047 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
SPG7-209ENST00000564047 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 EFCAB8A8MWE9 144 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 I6L893 689 aaPredicted RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 STC2O76061 302 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 URI1O94763 535 aaPredicted RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 PYGMP11217 842 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 CEBPBP17676 345 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 KDELR1P24390 212 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 WEE1P30291 646 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 CXCR5P32302 372 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 AVPR1AP37288 418 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 CETN2P41208 172 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 MTHFRP42898 656 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 HARS2P49590 506 aaKnown RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 ZNF135P52742 658 aaPredicted RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 PTPN5P54829 565 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 COPS2P61201 443 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 TUBB4BP68371 445 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 ZP2Q05996 745 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 PDK2Q15119 407 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 DCAF12L1Q5VU92 463 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 EP400NLQ6ZTU2 488 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPG7-209ENST00000564047 MAP7D3Q8IWC1 876 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 KCTD6Q8NC69 237 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 MNS1Q8NEH6 495 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 ITFG1Q8TB96 612 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 RAPGEF5Q92565 580 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 ACSF2Q96CM8 615 aaPredicted RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 C1orf74Q96LT6 269 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 PSMB7Q99436 277 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 DHX35Q9H5Z1 703 aaKnown RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 GKN1Q9NS71 199 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 GPATCH2LQ9NWQ4 482 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 MRFAP1Q9Y605 127 aa13.37□□□□□ -0.27
SPG7-209ENST00000564047 PTPRZ1P23471 2315 aaPredicted RBP13.37□□□□□ -0.27
SPG7-209ENST00000564047 C3orf70A6NLC5 250 aaPredicted RBP13.36□□□□□ -0.27
SPG7-209ENST00000564047 ZNF487B1APH4 448 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 PAGE1O75459 146 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 LATS1O95835 1130 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 HMBSP08397 361 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 L1CAMP32004 1257 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 CDH6P55285 790 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
SPG7-209ENST00000564047 KRT81Q14533 505 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 TAZQ16635 292 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 CA9Q16790 459 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 SEL1L2Q5TEA6 688 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 ADHFE1Q8IWW8 467 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 ING5Q8WYH8 240 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
SPG7-209ENST00000564047 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 PRRX2Q99811 253 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 DCLK3Q9C098 648 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 KLHL11Q9NVR0 708 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 SMPD4Q9NXE4 827 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 RCOR3Q9P2K3 495 aaPredicted RBP13.36□□□□□ -0.27
SPG7-209ENST00000564047 RNF14Q9UBS8 474 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 TECTAO75443 2155 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 CACNA1HO95180 2353 aa13.36□□□□□ -0.27
SPG7-209ENST00000564047 DMDP11532 3685 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 CEP104O60308 925 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 ACSL4O60488 711 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 SRGAP2O75044 1071 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 MOCS2O96007 188 aaPredicted RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 TCF3P15923 654 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 HTR7P34969 479 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 PTPN7P35236 360 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 CDKN2BP42772 138 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 SLC11A2P49281 568 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 MLLT6P55198 1093 aaPredicted RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 ZXDBP98169 803 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 SEMA3BQ13214 749 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 ZNF211Q13398 564 aaPredicted RBP13.35□□□□□ -0.27
SPG7-209ENST00000564047 DPYSL3Q14195 570 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 CLUL1Q15846 466 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
SPG7-209ENST00000564047 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms