RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 CCDC47Q96A33 483 aaKnown RBP5.56□□□□□ -1.52
CNOT1-205ENST00000563283 NEIL1Q96FI4 390 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-205ENST00000563283 ZBTB45Q96K62 511 aaPredicted RBP5.56□□□□□ -1.52
CNOT1-205ENST00000563283 SCYL1Q96KG9 808 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 GNRHR2Q96P88 292 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 TGS1Q96RS0 853 aaKnown RBP5.56□□□□□ -1.52
CNOT1-205ENST00000563283 YME1L1Q96TA2 773 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 STRA6Q9BX79 667 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 OSBPL2Q9H1P3 480 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 DEF6Q9H4E7 631 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 PDZD7Q9H5P4 517 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 PARVGQ9HBI0 331 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 TRIM39Q9HCM9 518 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 ALG13Q9NP73 1137 aaKnown RBP5.56□□□□□ -1.52
CNOT1-205ENST00000563283 C1orf112Q9NSG2 853 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 DNAJB4Q9UDY4 337 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 PIN4Q9Y237 131 aaKnown RBP5.56□□□□□ -1.52
CNOT1-205ENST00000563283 TCAF1Q9Y4C2 921 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 IPPQ9Y573 584 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 PCDHB7Q9Y5E2 793 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 B3GALT1Q9Y5Z6 326 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 MYO7AQ13402 2215 aa5.56□□□□□ -1.52
CNOT1-205ENST00000563283 CNTNAP2Q9UHC6 1331 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TDRD15B5MCY1 1934 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 PVALEFA0A1B0GWK0 134 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 SLC12A8A0AV02 714 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 FRMD3A2A2Y4 597 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TBKBP1A7MCY6 615 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TISP43B9A030 160 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 INO80B-WBP1J3KQ70 363 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ACKR2O00590 384 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 PTGESO14684 152 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 INPPL1O15357 1258 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 KLRC4O43908 158 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 FAM189A1O60320 539 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 GCNT3O95395 438 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ITGB1P05556 798 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 MYBP10242 640 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ZSCAN20P17040 1043 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 PROZP22891 400 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 SFPQP23246 707 aaKnown RBP eCLIP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 AKAP5P24588 427 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 NMT1P30419 496 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 SDHAP31040 664 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 CASP5P51878 434 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TFDP1Q14186 410 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ZC2HC1CQ53FD0 456 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 L1TD1Q5T7N2 865 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 KANK2Q63ZY3 851 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TCTN3Q6NUS6 607 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ZNF585AQ6P3V2 769 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 SLC39A4Q6P5W5 647 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 CD300LGQ6UXG3 332 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ALKAL1Q6UXT8 129 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 FAM43BQ6ZT52 329 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 FGD2Q7Z6J4 655 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ZBTB8OSQ8IWT0 167 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ELOA2Q8IYF1 753 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 LILRB2Q8N423 598 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 RNF169Q8NCN4 708 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ASB15Q8WXK1 588 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 RABGGTAQ92696 567 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 DLG3Q92796 817 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ACO2Q99798 780 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 PAAF1Q9BRP4 392 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TARS2Q9BW92 718 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 INO80BQ9C086 356 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TMEM117Q9H0C3 514 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 C2orf40Q9H1Z8 148 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 SEMA4AQ9H3S1 761 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 NXF3Q9H4D5 531 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 NRDE2Q9H7Z3 1164 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 MRPL44Q9H9J2 332 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 KMT5AQ9NQR1 393 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 TBC1D13Q9NVG8 400 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 RMND1Q9NWS8 449 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 CACNG4Q9UBN1 327 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 SEL1LQ9UBV2 794 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 MAN1B1Q9UKM7 699 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ASB1Q9Y576 335 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ANK1P16157 1881 aa5.55□□□□□ -1.52
CNOT1-205ENST00000563283 PDCD11Q14690 1871 aaKnown RBP5.55□□□□□ -1.52
CNOT1-205ENST00000563283 ARL5CA6NH57 179 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 NT5C1B-RDH14C9J2C7 533 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 ANKRD63C9JTQ0 380 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 H0YCG3 227 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 K7ERI5 159 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 PLD2O14939 933 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 MUSKO15146 869 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 FOXS1O43638 330 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 ERLIN2O94905 339 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 PRPF6O94906 941 aaKnown RBP5.54□□□□□ -1.52
CNOT1-205ENST00000563283 RHOBTB3O94955 611 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 POMCP01189 267 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 PRKCBP05771 671 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 STAG3L1P0CL83 205 aa5.54□□□□□ -1.52
CNOT1-205ENST00000563283 FOSL2P15408 326 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms