RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MEP1BQ16820 701 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 C3orf36Q3SXR2 165 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 RNASEH2BQ5TBB1 312 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 C8orf74Q6P047 294 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 C1orf186Q6ZWK4 172 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 TAF8Q7Z7C8 310 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 RFX6Q8HWS3 928 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 HACE1Q8IYU2 909 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 LSMEM2Q8N112 164 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ZCCHC7Q8N3Z6 543 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 RASGEF1CQ8N431 466 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ZNF653Q96CK0 615 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 COQ7Q99807 217 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 BTBD2Q9BX70 525 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 NUSAP1Q9BXS6 441 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 RASSF4Q9H2L5 321 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ZNF287Q9HBT7 754 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 NOD2Q9HC29 1040 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 TMOD3Q9NYL9 352 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CNIH4Q9P003 139 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 VPS18Q9P253 973 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 MYO1AQ9UBC5 1043 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 AGAP1Q9UPQ3 857 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 KCNK7Q9Y2U2 307 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 TRPV2Q9Y5S1 764 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 GPR45Q9Y5Y3 372 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 FAM205AQ6ZU69 1335 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 KIF27Q86VH2 1401 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 HEATR9A2RTY3 570 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ANKRD34BA5PLL1 514 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 FAM47DPA6NHR8 397 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 LRRIQ3A6PVS8 624 aaPredicted RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 CTAG2O75638 210 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CLPTM1O96005 669 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ALPPP05187 535 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 TUBBP07437 444 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ALPPL2P10696 532 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 MSNP26038 577 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 MECP2P51608 486 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 NME5P56597 212 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ST5P78524 1137 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 PAK1Q13153 545 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 RAB30Q15771 203 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 KCNA10Q16322 511 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 MYLK3Q32MK0 819 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ANKRD20A4Q4UJ75 823 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 TDRD12Q587J7 1177 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 ANKRD20A8PQ5CZ79 823 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ANKRD20A2Q5SQ80 823 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ANKRD20A1Q5TYW2 823 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ANKRD20A3Q5VUR7 823 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ATL3Q6DD88 541 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 BEND4Q6ZU67 534 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 RHOUQ7L0Q8 258 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 FAM20CQ8IXL6 584 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 OR6S1Q8NH40 331 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 THRSPQ92748 146 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 EZH1Q92800 747 aaPredicted RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 MSANTD3Q96H12 275 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CNTNAP3BQ96NU0 1288 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 RUFY1Q96T51 708 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 LPIN3Q9BQK8 851 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 COLEC11Q9BWP8 271 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CNTNAP3Q9BZ76 1288 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 QRSL1Q9H0R6 528 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 TAF1DQ9H5J8 278 aaPredicted RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 PRDM9Q9NQV7 894 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 POLE3Q9NRF9 147 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 DDX25Q9UHL0 483 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 TTC7AQ9ULT0 858 aaPredicted RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 CAPN11Q9UMQ6 739 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 PHF24Q9UPV7 400 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 GAB2Q9UQC2 676 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CBY1Q9Y3M2 126 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 MLH3Q9UHC1 1453 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ZC3H13Q5T200 1668 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 LRP6O75581 1613 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 MIA2Q96PC5 1412 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CCDC18Q5T9S5 1454 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 SLC22A31A6NKX4 558 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 RETP07949 1114 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 STAG3L3P0CL85 134 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CCDC192P0DO97 292 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 PTPN3P26045 913 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 STARP49675 285 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 YPEL5P62699 121 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 OCRLQ01968 901 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 MYO1EQ12965 1108 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TNFAIP1Q13829 316 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 DDX39BQ13838 428 aaKnown RBP4.94□□□□□ -1.62
SMG1-207ENST00000563235 LPIN1Q14693 890 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CCDC14Q49A88 953 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 TMEM177Q53S58 311 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CCDC62Q6P9F0 684 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 CLEC17AQ6ZS10 378 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 REXO1L1PQ8IX06 675 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 KIAA2013Q8IYS2 634 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 FRMD1Q8N878 549 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 AKR7LQ8NHP1 331 aa4.94□□□□□ -1.62
SMG1-207ENST00000563235 THAP4Q8WY91 577 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms