RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 VPS11Q9H270 941 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ARL5CA6NH57 179 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 F8VP50 259 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 DCTN3O75935 186 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 HSPA8P11142 646 aaKnown RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 CYBAP13498 195 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TMPRSS15P98073 1019 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 XRCC4Q13426 336 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PUS10Q3MIT2 529 aaKnown RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC25A52Q3SY17 297 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PPP1R15BQ5SWA1 713 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TTC23LQ6PF05 361 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 LRRC6Q86X45 466 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 CRYBG2Q8N1P7 616 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC4A11Q8NBS3 891 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 HTR3CQ8WXA8 447 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PDLIM7Q9NR12 457 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 GDAP2Q9NXN4 497 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 WDR37Q9Y2I8 494 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ZNF623O75123 536 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 APOA4P06727 396 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 IRX4P78413 519 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 BEND6Q5SZJ8 279 aaPredicted RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC39A4Q6P5W5 647 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PSRC1Q6PGN9 363 aaPredicted RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 IPMKQ8NFU5 416 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ATG4AQ8WYN0 398 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TRIB2Q92519 343 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 EDEM1Q92611 657 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC9A7Q96T83 725 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PCDHB18PQ96TA0 734 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 EPC1Q9H2F5 836 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SAGE1Q9NXZ1 904 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC25A13Q9UJS0 675 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 CHMP2BQ9UQN3 213 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ZNF510Q9Y2H8 683 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC4A7Q9Y6M7 1214 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ZSCAN5CA6NGD5 496 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 E5RI56 91 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 RNF225M0QZC1 329 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 HOXB8P17481 243 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 HADHAP40939 763 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 PPP3CCP48454 512 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 ACTN3Q08043 901 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 NAB1Q13506 487 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 ARHGEF7Q14155 803 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 TAF11Q15544 211 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 MARC1Q5VT66 337 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 GDF6Q6KF10 455 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 C3orf62Q6ZUJ4 267 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 RNF157Q96PX1 679 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 PITPNM3Q9BZ71 974 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 COMMD8Q9NX08 183 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 ARHGEF38Q9NXL2 777 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 DMGDHQ9UI17 866 aaKnown RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 ZMYM5Q9UJ78 669 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 L1RE1Q9UN81 338 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 HSPA4LO95757 839 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 FGBP02675 491 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 MAPK8P45983 427 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 KYNUQ16719 465 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 FBXW10Q5XX13 1052 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 MRNIPQ6NTE8 343 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 CNKSR3Q6P9H4 555 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 TMEM174Q8WUU8 243 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 PTPRN2Q92932 1015 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 ZNF669Q96BR6 464 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 ACSF2Q96CM8 615 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 FAM167BQ9BTA0 163 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 STRA6Q9BX79 667 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 C11orf49Q9H6J7 331 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 APOBEC3GQ9HC16 384 aaKnown RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 TXLNGQ9NUQ3 528 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 THG1LQ9NWX6 298 aaKnown RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 TIMM44O43615 452 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 SNX2O60749 519 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 RALBP11234 206 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 CDC25CP30307 473 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 HOXD13P35453 343 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 BRCC3P46736 316 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 NPY2RP49146 381 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 TUBP50607 506 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 SLC45A4Q5BKX6 768 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 NXNQ6DKJ4 435 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 SDE2Q6IQ49 451 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 DRAXINQ8NBI3 349 aaPredicted RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 DBF4BQ8NFT6 615 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 FBXO25Q8TCJ0 367 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 DCUN1D1Q96GG9 259 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 SNRNP25Q9BV90 132 aaKnown RBP7.76□□□□□ -1.17
TCF4-216ENST00000562680 RHBDL2Q9NX52 303 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 VNN1O95497 513 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 CCL5P13501 91 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 LRPAP1P30533 357 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 TRADDQ15628 312 aa7.76□□□□□ -1.17
TCF4-216ENST00000562680 MUM1Q2TAK8 710 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms