RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 HACE1Q8IYU2 909 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 CLASRPQ8N2M8 674 aaKnown RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 CUL5Q93034 780 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 MRGPRX1Q96LB2 322 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 CEP89Q96ST8 783 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 SEC62Q99442 399 aaKnown RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 ELF4Q99607 663 aaPredicted RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 RNF32Q9H0A6 362 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 SLC6A17Q9H1V8 727 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 RIOX1Q9H6W3 641 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 KAT14Q9H8E8 782 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 USP36Q9P275 1121 aaKnown RBP6.37□□□□□ -1.39
TCF4-213ENST00000562543 GABBR1Q9UBS5 961 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 ACSL6Q9UKU0 697 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 ASB3Q9Y575 518 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 PKDREJQ9NTG1 2253 aa6.37□□□□□ -1.39
TCF4-213ENST00000562543 OPA1O60313 960 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 MARCH6O60337 910 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 TSPAN3O60637 253 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 B3GAT3O94766 335 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 APODP05090 189 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 ITGA2BP08514 1039 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 USP17L7P0C7H9 530 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 MED14OSP0DP75 135 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 EIF2DP41214 584 aaKnown RBP6.36□□□□□ -1.39
TCF4-213ENST00000562543 TNFSF9P41273 254 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 TNFRSF4P43489 277 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 LINC00310P59036 64 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 SEPT6Q14141 434 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 NUMA1Q14980 2115 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 ISXQ2M1V0 245 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 SP5Q6BEB4 398 aaPredicted RBP6.36□□□□□ -1.39
TCF4-213ENST00000562543 NOTUMQ6P988 496 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 SRGAP1Q7Z6B7 1085 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 XYLT1Q86Y38 959 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 ARL14Q8N4G2 192 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 IPO4Q8TEX9 1081 aaKnown RBP6.36□□□□□ -1.39
TCF4-213ENST00000562543 Q96M66 194 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 PNKPQ96T60 521 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 SP110Q9HB58 689 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 SUCLA2Q9P2R7 463 aaPredicted RBP6.36□□□□□ -1.39
TCF4-213ENST00000562543 MAD2L2Q9UI95 211 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 DOCK9Q9BZ29 2069 aa6.36□□□□□ -1.39
TCF4-213ENST00000562543 MAP1AP78559 2803 aaPredicted RBP6.36□□□□□ -1.39
TCF4-213ENST00000562543 MEGF8Q7Z7M0 2845 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 MYOFQ9NZM1 2061 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 RYR3Q15413 4870 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 FAM221AA4D161 298 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 KCNJ18B7U540 433 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 H7C4K7 107 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 SYN3O14994 580 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 YKT6O15498 198 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 TRAPPC3O43617 180 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 CYTH3O43739 400 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 TSPAN1O60635 241 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 TNFSF15O95150 251 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 NFATC1O95644 943 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 HPXP02790 462 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 THP07101 528 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 ZFYP08048 801 aaPredicted RBP6.35□□□□□ -1.39
TCF4-213ENST00000562543 THEGLP0DJG4 465 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 LIPCP11150 499 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 RARGP13631 454 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 HOXA5P20719 270 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 AXLP30530 894 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 PTGER4P35408 488 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 GRIA2P42262 883 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 SLC6A11P48066 632 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 PRKCEQ02156 737 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 LTBQ06643 244 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 SKOR2Q2VWA4 1001 aaPredicted RBP6.35□□□□□ -1.39
TCF4-213ENST00000562543 LACTB2Q53H82 288 aaPredicted RBP6.35□□□□□ -1.39
TCF4-213ENST00000562543 MANEAQ5SRI9 462 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 PRAMEF14Q5SWL7 426 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 SCARA3Q6AZY7 606 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 C14orf80Q86SX3 495 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 TMEM150AQ86TG1 271 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 VASH2Q86V25 355 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 MIB1Q86YT6 1006 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 MAB21L3Q8N8X9 362 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 GLIS1Q8NBF1 620 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 CPT1CQ8TCG5 803 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 GRAMD1AQ96CP6 724 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 ATXN7L3BQ96GX2 97 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 CCDC120Q96HB5 630 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 CPB2Q96IY4 423 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 C5orf34Q96MH7 638 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 GCNAQ96QF7 691 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 SLC12A9Q9BXP2 914 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 CXCL16Q9H2A7 254 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 PCDHGA7Q9Y5G6 932 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 SCN8AQ9UQD0 1980 aa6.35□□□□□ -1.39
TCF4-213ENST00000562543 BTBD18B2RXH4 712 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 GFRA2O00451 464 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 IGLV3-19P01714 112 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 CYP17A1P05093 508 aa6.34□□□□□ -1.39
TCF4-213ENST00000562543 DDX6P26196 483 aaKnown RBP eCLIP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms