RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 PNPLA8Q9NP80 782 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 CLIC5Q9NZA1 410 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 MARCH2Q9P0N8 246 aa19.25■□□□□ 0.67
KATNB1-202ENST00000562542 A0A087X0B3 334 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 B8ZZF3 427 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 WNT1P04628 370 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 CD38P28907 300 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 HLA-FP30511 346 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 KIF11P52732 1056 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 AP3M2P53677 418 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 UCNP55089 124 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 PCBP4P57723 403 aaKnown RBP19.24■□□□□ 0.67
KATNB1-202ENST00000562542 ASIC1P78348 528 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 LY6DQ14210 128 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 MPPE1Q53F39 396 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 FAM26FQ5R3K3 315 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 KDM7AQ6ZMT4 941 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 EPM2AIP1Q7L775 607 aaPredicted RBP19.24■□□□□ 0.67
KATNB1-202ENST00000562542 ZNF276Q8N554 614 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 CYFIP2Q96F07 1278 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 LRRC27Q9C0I9 530 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 ABCB8Q9NUT2 735 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 FBXL12Q9NXK8 326 aa19.24■□□□□ 0.67
KATNB1-202ENST00000562542 MYLKQ15746 1914 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 TP53BP1Q12888 1972 aaPredicted RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 VPS37CA5D8V6 355 aaPredicted RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 ATP5BP06576 529 aaKnown RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 C6P13671 934 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 CKMT2P17540 419 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 HOXD9P28356 352 aaPredicted RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 SNRPFP62306 86 aaKnown RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 SGSM1Q2NKQ1 1148 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 NCEH1Q6PIU2 408 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 SEMA4CQ9C0C4 833 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 TNMDQ9H2S6 317 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 PABPC3Q9H361 631 aaKnown RBP19.23■□□□□ 0.67
KATNB1-202ENST00000562542 GGA2Q9UJY4 613 aa19.23■□□□□ 0.67
KATNB1-202ENST00000562542 PLXNA2O75051 1894 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 LRRC72A6NJI9 287 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 LRRIQ3A6PVS8 624 aaPredicted RBP19.22■□□□□ 0.67
KATNB1-202ENST00000562542 SLC28A2O43868 658 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 VNN1O95497 513 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 GALCP54803 685 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 INSM1Q01101 510 aaPredicted RBP19.22■□□□□ 0.67
KATNB1-202ENST00000562542 SFSWAPQ12872 951 aaKnown RBP19.22■□□□□ 0.67
KATNB1-202ENST00000562542 BNIP3Q12983 259 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 SLC45A4Q5BKX6 768 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 USP30Q70CQ3 517 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 AHI1Q8N157 1196 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 PLEKHO2Q8TD55 490 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 SUN2Q9UH99 717 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 ADAMTS1Q9UHI8 967 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 SCML1Q9UN30 329 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 UBE4BO95155 1302 aa19.22■□□□□ 0.67
KATNB1-202ENST00000562542 RNASEH1O60930 286 aaKnown RBP19.21■□□□□ 0.67
KATNB1-202ENST00000562542 RNASEH2AO75792 299 aaKnown RBP19.21■□□□□ 0.67
KATNB1-202ENST00000562542 C4BPAP04003 597 aaKnown RBP19.21■□□□□ 0.67
KATNB1-202ENST00000562542 DLDP09622 509 aaKnown RBP19.21■□□□□ 0.67
KATNB1-202ENST00000562542 C7P10643 843 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 PABPC1P11940 636 aaKnown RBP19.21■□□□□ 0.67
KATNB1-202ENST00000562542 HARS2P49590 506 aaKnown RBP19.21■□□□□ 0.67
KATNB1-202ENST00000562542 PDE4CQ08493 712 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 PKDCCQ504Y2 493 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 MBLAC2Q68D91 279 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 SPOPLQ6IQ16 392 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 ADIPOR2Q86V24 386 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 CACTIN-AS1Q8N1I8 211 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 ARHGAP18Q8N392 663 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 DCBLD1Q8N8Z6 715 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 PLD4Q96BZ4 506 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 SERAC1Q96JX3 654 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 TWNKQ96RR1 684 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 OMDQ99983 421 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 MTG2Q9H4K7 406 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 EBF2Q9HAK2 575 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 SERGEFQ9UGK8 458 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 COL6A6A6NMZ7 2263 aa19.21■□□□□ 0.67
KATNB1-202ENST00000562542 A0A1W2PP55 124 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 WISP1O95388 367 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 POLR2EP19388 210 aaKnown RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 ASPAP45381 313 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 RABEP1Q15276 862 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 DHX40Q8IX18 779 aaKnown RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 FAM217AQ8IXS0 508 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 OXR1Q8N573 874 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 OR2T34Q8NGX1 318 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 PARD3BQ8TEW8 1205 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 RFFLQ8WZ73 363 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 TMA16Q96EY4 203 aaKnown RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 ZNF578Q96N58 590 aaPredicted RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 NT5C1AQ9BXI3 368 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 RSPH9Q9H1X1 276 aaPredicted RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.2■□□□□ 0.66
KATNB1-202ENST00000562542 USP3Q9Y6I4 520 aa19.2■□□□□ 0.66
KATNB1-202ENST00000562542 TLR4O00206 839 aa19.19■□□□□ 0.66
KATNB1-202ENST00000562542 WNT9AO14904 365 aa19.19■□□□□ 0.66
KATNB1-202ENST00000562542 KLK10O43240 276 aa19.19■□□□□ 0.66
KATNB1-202ENST00000562542 MT-CO3P00414 261 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms