RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PITX1P78337 314 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 ZNF211Q13398 564 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 ZFYVE27Q5T4F4 411 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 TRIM68Q6AZZ1 485 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 KLHDC10Q6PID8 442 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 RSRC2Q7L4I2 434 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 EXD1Q8NHP7 514 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 MS4A14Q96JA4 679 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 TRMT61BQ9BVS5 477 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 KIF9Q9HAQ2 790 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 DNMT3LQ9UJW3 386 aa23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 TTC7AQ9ULT0 858 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-202ENST00000562045 TNFRSF10AO00220 468 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 PGRMC1O00264 195 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ARNTLO00327 626 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 MSI1O43347 362 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ZRANB2O95218 330 aaKnown RBP eCLIP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 TRUB2O95900 331 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 PYGMP11217 842 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 TFE3P19532 575 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 IL1R2P27930 398 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ZXDAP98168 799 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 TNK2Q07912 1038 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ODF2Q5BJF6 829 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 DEPDC1BQ8WUY9 529 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 E2F7Q96AV8 911 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 RBM41Q96IZ5 413 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 LINC00597Q9H2U6 94 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ZWILCHQ9H900 591 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 PCSK1NQ9UHG2 260 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 WNT6Q9Y6F9 365 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 CTAGE15A4D2H0 777 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 M0QYT0 321 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 DCXO43602 365 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ENDOD1O94919 500 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 HMBSP08397 361 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 CTAGE8P0CG41 777 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 SRFP11831 508 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 TCF3P15923 654 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 BOLA3Q53S33 107 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 TXNRD3NBQ6F5E7 133 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 SCYL2Q6P3W7 929 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ZNF572Q7Z3I7 529 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 BNIPLQ7Z465 357 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 CTAGE6Q86UF2 777 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 CTAGE4Q8IX94 777 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 ADAM32Q8TC27 787 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 NAP1L3Q99457 506 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 MARCH2Q9P0N8 246 aa23.28■■□□□ 1.32
SYNGR3-202ENST00000562045 PDE2AO00408 941 aaPredicted RBP23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 KRT1P04264 644 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 RDXP35241 583 aaKnown RBP23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 CETN2P41208 172 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 RCOR2Q8IZ40 523 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 TTC8Q8TAM2 541 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 RNF139Q8WU17 664 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 PGAP3Q96FM1 320 aaPredicted RBP23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 FAM83CQ9BQN1 747 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 ADAM33Q9BZ11 813 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 EPHX3Q9H6B9 360 aa23.27■■□□□ 1.32
SYNGR3-202ENST00000562045 TECTAO75443 2155 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 MYOFQ9NZM1 2061 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 OTOL1A6NHN0 477 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 FGGP02679 453 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 DEUP1Q05D60 604 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 SMTNL2Q2TAL5 461 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 ATP13A4Q4VNC1 1196 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 RAB6CQ53S08 254 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 OTUD1Q5VV17 481 aaPredicted RBP23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 CCDC50Q8IVM0 306 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 DQX1Q8TE96 717 aaKnown RBP23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 PEBP4Q96S96 227 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 RAB6CQ9H0N0 254 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 BRD9Q9H8M2 597 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 SLC2A4RGQ9NR83 387 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 CUL9Q8IWT3 2517 aa23.26■■□□□ 1.31
SYNGR3-202ENST00000562045 SLC12A8A0AV02 714 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 PI4K2BG5E9Z4 385 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 STC2O76061 302 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 F9P00740 461 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 RARAP10276 462 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 ARSAP15289 507 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 KCNT1Q5JUK3 1230 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 MSANTD2Q6P1R3 559 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 YAF2Q8IY57 180 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 TEKT4Q8WW24 435 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 EDAQ92838 391 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 CDK5RAP1Q96SZ6 601 aaKnown RBP23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 EBF3Q9H4W6 596 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 HPS4Q9NQG7 708 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 GTSE1Q9NYZ3 720 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 SMARCAL1Q9NZC9 954 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 CALCOCO1Q9P1Z2 691 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 CHADO15335 359 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 KLKB1P03952 638 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 COPS2P61201 443 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 NME3Q13232 169 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 AADACL2Q6P093 401 aa23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 CYP4V2Q6ZWL3 525 aaPredicted RBP23.25■■□□□ 1.31
SYNGR3-202ENST00000562045 TADA2BQ86TJ2 420 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms