RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TMEM86AQ8N2M4 240 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 GSTCDQ8NEC7 633 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 PCDH19Q8TAB3 1148 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 CKAP2Q8WWK9 683 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 PPP1R10Q96QC0 940 aaKnown RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 SMC6Q96SB8 1091 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 MIOSQ9NXC5 875 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 FAM47DPA6NHR8 397 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 RFXAPO00287 272 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 TRIM66O15016 1216 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 B4GALT3O60512 393 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 ZBED1O96006 694 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 KRT15P19012 456 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 L1CAMP32004 1257 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 GBP2P32456 591 aaPredicted RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 STX2P32856 288 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 MATKP42679 507 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 IFNAR2P48551 515 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 LHX1P48742 406 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 SCNN1GP51170 649 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 IL9RQ01113 521 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 SOX4Q06945 474 aaPredicted RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 NOMO2Q5JPE7 1267 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 EFHC2Q5JST6 749 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 FNBP1LQ5T0N5 605 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 TMCO4Q5TGY1 634 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 ANKRD22Q5VYY1 191 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 ZNF280BQ86YH2 543 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 CMTR2Q8IYT2 770 aaKnown RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 PQLC3Q8N755 202 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 KCTD13Q8WZ19 329 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 MAGEB18Q96M61 343 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 KLC2Q9H0B6 622 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 NRDE2Q9H7Z3 1164 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 C10orf88Q9H8K7 445 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 ACTR5Q9H9F9 607 aaPredicted RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 USP29Q9HBJ7 922 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 TBC1D13Q9NVG8 400 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 RCOR3Q9P2K3 495 aaPredicted RBP12.01□□□□□ -0.49
PCAT1-202ENST00000561978 HEY1Q9Y5J3 304 aa12.01□□□□□ -0.49
PCAT1-202ENST00000561978 EPOPA6NHQ4 379 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 ANKRD65E5RJM6 399 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 GABRDO14764 452 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 KCNN4O15554 427 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 ZNF189O75820 626 aaPredicted RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 CYP2F1P24903 491 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 GCAP28676 217 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 GRIN2CQ14957 1233 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 SLC25A52Q3SY17 297 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 RAB6CQ53S08 254 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 PPP6R3Q5H9R7 873 aaPredicted RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 HP1BP3Q5SSJ5 553 aaPredicted RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 VARS2Q5ST30 1063 aaKnown RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 ANKMY2Q8IV38 441 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 LRRC43Q8N309 656 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 DEFB123Q8N688 67 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 ANKRD42Q8N9B4 389 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 FBXO36Q8NEA4 188 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 MGARPQ8TDB4 240 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 TGS1Q96RS0 853 aaKnown RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 RAB6CQ9H0N0 254 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 DHX35Q9H5Z1 703 aaKnown RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 ACSS3Q9H6R3 686 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 CWH43Q9H720 699 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 SSU72Q9NP77 194 aaKnown RBP12□□□□□ -0.49
PCAT1-202ENST00000561978 DONSONQ9NYP3 566 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 CACNG4Q9UBN1 327 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 DNAJB4Q9UDY4 337 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 AP4E1Q9UPM8 1137 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 GIT1Q9Y2X7 761 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 BRWD1Q9NSI6 2320 aa12□□□□□ -0.49
PCAT1-202ENST00000561978 NT5C1B-RDH14C9J2C7 533 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 PTGESO14684 152 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
PCAT1-202ENST00000561978 DDHD2O94830 711 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 FSBPO95073 299 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 CSPG5O95196 566 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 THP07101 528 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 CREB1P16220 341 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 NPR3P17342 541 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 RPL9P32969 192 aaKnown RBP11.99□□□□□ -0.49
PCAT1-202ENST00000561978 CTNNB1P35222 781 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 NOS2P35228 1153 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 ARL4AP40617 200 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 GPX6P59796 221 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 YWHAZP63104 245 aaKnown RBP11.99□□□□□ -0.49
PCAT1-202ENST00000561978 KCNJ11Q14654 390 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 BBS9Q3SYG4 887 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 PIGZQ86VD9 579 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 MICALL1Q8N3F8 863 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 CLP1Q92989 425 aaKnown RBP11.99□□□□□ -0.49
PCAT1-202ENST00000561978 GRAMD1AQ96CP6 724 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 CYTH2Q99418 400 aa11.99□□□□□ -0.49
PCAT1-202ENST00000561978 LPIN3Q9BQK8 851 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms