RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, human

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERC1-215	ENST00000561436	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	FAM167B	Q9BTA0	163 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	R3HDML	Q9H3Y0	253 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	RIOX1	Q9H6W3	641 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	SEPSECS	Q9HD40	501 aa	Known RBP	4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	SAYSD1	Q9NPB0	183 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	KLC4	Q9NSK0	619 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	TERF2IP	Q9NYB0	399 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	IGSF9	Q9P2J2	1179 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	GRHPR	Q9UBQ7	328 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	SNX14	Q9Y5W7	946 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	NRAP	Q86VF7	1730 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	ADCY9	O60503	1353 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	NSD2	O96028	1365 aa		4.26	□□□□□ -1.73
HERC1-215	ENST00000561436	MAST3	O60307	1309 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PNMA6E	A0A0J9YXQ4	647 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	EFCAB8	A8MWE9	144 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	VWC2L	B2RUY7	222 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436		M0R3H8	397 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PROM1	O43490	865 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	USP1	O94782	785 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ACTL6B	O94805	426 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PDHA1	P08559	390 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ELFN1	P0C7U0	828 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	LIPA	P38571	399 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	GSTM5	P46439	218 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	DGKQ	P52824	942 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PDE1A	P54750	535 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	TIRAP	P58753	221 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	SUMO2	P61956	95 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	SIM1	P81133	766 aa	Predicted RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	POU5F1B	Q06416	359 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	BMPR2	Q13873	1038 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PTPRR	Q15256	657 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	TAF12	Q16514	161 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	P3H1	Q32P28	736 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ALF	Q53S48	1182 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ABLIM2	Q6H8Q1	611 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	VWA1	Q6PCB0	445 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	RAB11FIP2	Q7L804	512 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	CAND1	Q86VP6	1230 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	LRRC71	Q8N4P6	559 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	SIMC1	Q8NDZ2	872 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	XAGE5	Q8WWM1	108 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	SOCS4	Q8WXH5	440 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	GLG1	Q92896	1179 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	RSPRY1	Q96DX4	576 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ZBTB45	Q96K62	511 aa	Predicted RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	COQ10A	Q96MF6	247 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	CRAMP1	Q96RY5	1269 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	RTKN	Q9BST9	563 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	TP63	Q9H3D4	680 aa	Predicted RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ALG13	Q9NP73	1137 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	DRG1	Q9Y295	367 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	ALS2	Q96Q42	1657 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	RAB3GAP2	Q9H2M9	1393 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PLEKHG2	Q9H7P9	1386 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	PPL	O60437	1756 aa		4.25	□□□□□ -1.73
HERC1-215	ENST00000561436	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	POLR2A	P24928	1970 aa	Known RBP	4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	ATP10D	Q9P241	1426 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436		A1L4Q6	167 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	CCDC151	A5D8V7	595 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	OR2W5	A6NFC9	320 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	HMX3	A6NHT5	357 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436		J3KTA2	159 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TNFRSF6B	O95407	300 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	NTSR2	O95665	410 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	FGA	P02671	866 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TMEM225B	P0DP42	221 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	NTSR1	P30989	418 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	AKT1	P31749	480 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	EIF4A1	P60842	406 aa	Known RBP	4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	AP2B1	P63010	937 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	MRPS35	P82673	323 aa	Known RBP	4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TAP1	Q03518	808 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	POSTN	Q15063	836 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TIGD6	Q17RP2	521 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TREML2	Q5T2D2	321 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	SLC9A4	Q6AI14	798 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TANGO2	Q6ICL3	276 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	SULT6B1	Q6IMI4	303 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	RINT1	Q6NUQ1	792 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	P3H2	Q8IVL5	708 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	TBC1D20	Q96BZ9	403 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	R3HDM4	Q96D70	268 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	PBK	Q96KB5	322 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	SORBS1	Q9BX66	1292 aa	Known RBP	4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	ASB6	Q9NWX5	421 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	FOXJ2	Q9P0K8	574 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	KIF17	Q9P2E2	1029 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	LRIT1	Q9P2V4	623 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	VPS51	Q9UID3	782 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	ST3GAL5	Q9UNP4	418 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	SLC27A6	Q9Y2P4	619 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	PLCH1	Q4KWH8	1693 aa		4.24	□□□□□ -1.73
HERC1-215	ENST00000561436	LMO7	Q8WWI1	1683 aa		4.24	□□□□□ -1.73

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