RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	MAP7D1	Q3KQU3	841 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	EOGT	Q5NDL2	527 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	BTBD8	Q5XKL5	378 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	GJB7	Q6PEY0	223 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	LCLAT1	Q6UWP7	414 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	RSRC2	Q7L4I2	434 aa	Known RBP	7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	IRF2BP1	Q8IU81	584 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	DENND1C	Q8IV53	801 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	FMNL3	Q8IVF7	1028 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	FAM217A	Q8IXS0	508 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	NETO1	Q8TDF5	533 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	SLC35F5	Q8WV83	523 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	KCTD13	Q8WZ19	329 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	LOXL4	Q96JB6	756 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	GTPBP4	Q9BZE4	634 aa	Known RBP	7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	INTS2	Q9H0H0	1204 aa	Known RBP	7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	ACP6	Q9NPH0	428 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	CACNA2D2	Q9NY47	1150 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	HESX1	Q9UBX0	185 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	FBXO10	Q9UK96	956 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	STARD13	Q9Y3M8	1113 aa		7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	ATXN2	Q99700	1313 aa	Known RBP	7.74	□□□□□ -1.17
ZEB1-223	ENST00000561304	LNP1	A1A4G5	178 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	BCLAF3	A2AJT9	711 aa	Known RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	WASH3P	C4AMC7	463 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	ERVH48-1	M5A8F1	160 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	GFRA2	O00451	464 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	P4HA2	O15460	535 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	SETSIP	P0DME0	302 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	P2RY2	P41231	377 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	MFAP3	P55082	362 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	FOXK2	Q01167	660 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	GCNT1	Q02742	428 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	TRIP4	Q15650	581 aa	Predicted RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	ELF2	Q15723	593 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	HSF5	Q4G112	596 aa	Predicted RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	AASDH	Q4L235	1098 aa	Predicted RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	BSPRY	Q5W0U4	402 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	TMEM215	Q68D42	235 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	DENND1B	Q6P3S1	775 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	ARMCX6	Q7L4S7	300 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	TADA2B	Q86TJ2	420 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	ARHGAP18	Q8N392	663 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CCDC26	Q8TAB7	109 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	WFDC5	Q8TCV5	224 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	PLD4	Q96BZ4	506 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	MYEOV	Q96EZ4	313 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	PIWIL1	Q96J94	861 aa	Known RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	XPO6	Q96QU8	1125 aa	Known RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CDK5RAP1	Q96SZ6	601 aa	Known RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	RTKN	Q9BST9	563 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CRACR2A	Q9BSW2	395 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	DNAI2	Q9GZS0	605 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	LRRC4	Q9HBW1	653 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	POLM	Q9NP87	494 aa	Predicted RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CALCOCO1	Q9P1Z2	691 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	WDR35	Q9P2L0	1181 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CYTH4	Q9UIA0	394 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CNTN6	Q9UQ52	1028 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	PCDHGA5	Q9Y5G8	931 aa		7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	CNOT1	A5YKK6	2376 aa	Known RBP	7.73	□□□□□ -1.17
ZEB1-223	ENST00000561304	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	BECN2	A8MW95	431 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TM4SF5	O14894	197 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TSPAN3	O60637	253 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	RHOBTB1	O94844	696 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CAVIN2	O95810	425 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	IGLV3-27	P01718	113 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	FYN	P06241	537 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	SLC9A1	P19634	815 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	HOXD9	P28356	352 aa	Predicted RBP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	NTSR1	P30989	418 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	SLC6A4	P31645	630 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	IL12RB1	P42701	662 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	PTGER3	P43115	390 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	DHPS	P49366	369 aa	Predicted RBP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	SLC8A3	P57103	927 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	COG7	P83436	770 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CACNA1E	Q15878	2313 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CNGA2	Q16280	664 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	DPCR1	Q3MIW9	517 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	USP39	Q53GS9	565 aa	Known RBP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	MSANTD2	Q6P1R3	559 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TRIM65	Q6PJ69	517 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TMEFF1	Q8IYR6	380 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CHPF	Q8IZ52	775 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	SIX6OS1	Q8N1H7	587 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	SCML4	Q8N228	414 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CPXM2	Q8N436	756 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	DEFB119	Q8N690	84 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	TRIML1	Q8N9V2	468 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	C12orf50	Q8NA57	414 aa	Predicted RBP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	IPO4	Q8TEX9	1081 aa	Known RBP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	SORCS1	Q8WY21	1168 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	IPO9	Q96P70	1041 aa	Known RBP	7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	GABRG3	Q99928	467 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	MIS12	Q9H081	205 aa		7.72	□□□□□ -1.17
ZEB1-223	ENST00000561304	CLSTN2	Q9H4D0	955 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms