RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PLD4Q96BZ4 506 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 KREMEN1Q96MU8 473 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 NT5C1BQ96P26 610 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 HINFPQ9BQA5 517 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 CNGB3Q9NQW8 809 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.2□□□□□ -1.26
SPG11-224ENST00000561268 OLA1Q9NTK5 396 aaKnown RBP7.2□□□□□ -1.26
SPG11-224ENST00000561268 ZNHIT6Q9NWK9 470 aaKnown RBP7.2□□□□□ -1.26
SPG11-224ENST00000561268 LSM7Q9UK45 103 aaKnown RBP7.2□□□□□ -1.26
SPG11-224ENST00000561268 RAB21Q9UL25 225 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 KIAA1257Q9ULG3 409 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 FHOD1Q9Y613 1164 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.2□□□□□ -1.26
SPG11-224ENST00000561268 ACACBO00763 2458 aa7.2□□□□□ -1.26
SPG11-224ENST00000561268 KMT2BQ9UMN6 2715 aaPredicted RBP7.2□□□□□ -1.26
SPG11-224ENST00000561268 PLXNB3Q9ULL4 1909 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 LRRK1Q38SD2 2015 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 A0A1W2PQF6 199 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 BCLAF3A2AJT9 711 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 GTPBP10A4D1E9 387 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 PRRT4C9JH25 899 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 MFAP3LO75121 409 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 GNA14O95837 355 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 ZBED1O96006 694 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 CISD3P0C7P0 127 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 PNMA6AP0CW24 399 aaPredicted RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 RALAP11233 206 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 TYRP14679 529 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 BCKDHBP21953 392 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 HOXD12P35452 270 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 MPLP40238 635 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 PXNP49023 591 aaPredicted RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 ATXN1P54253 815 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 MFAP3P55082 362 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 COG7P83436 770 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 KDSRQ06136 332 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 RING1Q06587 406 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 ADIGQ0VDE8 80 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 LPAL2Q16609 132 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 MAP7D1Q3KQU3 841 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 SPDYCQ5MJ68 293 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 C10orf120Q5SQS8 335 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 EGFLAMQ63HQ2 1017 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 GRAMD4Q6IC98 578 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 BEND5Q7L4P6 421 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 TRMT11Q7Z4G4 463 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 ARHGEF19Q8IW93 802 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 TXLNBQ8N3L3 684 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.19□□□□□ -1.26
SPG11-224ENST00000561268 ZNF513Q8N8E2 541 aaPredicted RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 TXNDC5Q8NBS9 432 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 IRGQQ8WZA9 623 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 TSC1Q92574 1164 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 KAT5Q92993 513 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 NUP58Q9BVL2 599 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 ULBP1Q9BZM6 244 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 DCLK3Q9C098 648 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 THAP9Q9H5L6 903 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 VIPAS39Q9H9C1 493 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 ARFGAP3Q9NP61 516 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 TRMT1Q9NXH9 659 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 CALCOCO1Q9P1Z2 691 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 WDR35Q9P2L0 1181 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 DEC1Q9P2X7 70 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 EVLQ9UI08 416 aaPredicted RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 CDC23Q9UJX2 597 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 CDV3Q9UKY7 258 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 USP18Q9UMW8 372 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 CTNND2Q9UQB3 1225 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 ZNF510Q9Y2H8 683 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 HBS1LQ9Y450 684 aaKnown RBP7.19□□□□□ -1.26
SPG11-224ENST00000561268 ADGRG1Q9Y653 693 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 CACNA1BQ00975 2339 aa7.19□□□□□ -1.26
SPG11-224ENST00000561268 KNL1Q8NG31 2342 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 ARID1BQ8NFD5 2236 aaPredicted RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 A0A1W2PQJ5 194 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 TARSL2A2RTX5 802 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 YJEFN3A6XGL0 299 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 E7ENQ6 273 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 NEDD8-MDP1E9PL57 170 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 BIN1O00499 593 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 MAP2K7O14733 419 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 NPC1O15118 1278 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 TRIM24O15164 1050 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 KLF8O95600 359 aaPredicted RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 IGLV3-19P01714 112 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 IGLV3-25P01717 112 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 IRF1P10914 325 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 GABRG2P18507 467 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 HOXD9P28356 352 aaPredicted RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 NTSR1P30989 418 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 CORO1AP31146 461 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 CHKAP35790 457 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 TKTL1P51854 596 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 YWHAGP61981 247 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPG11-224ENST00000561268 SLC20A2Q08357 652 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 KCNH2Q12809 1159 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms