RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 UXTQ9UBK9 157 aaPredicted RBP5.72□□□□□ -1.49
ZEB1-220ENST00000560909 GBF1Q92538 1859 aa5.72□□□□□ -1.49
ZEB1-220ENST00000560909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 GRID2IPA4D2P6 1211 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 USP27XA6NNY8 438 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 EFSO43281 561 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 KRT86O43790 486 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 BUB1BO60566 1050 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 RFPL2O75678 378 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PROSCO94903 275 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 FGF19O95750 216 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 OAS1P00973 400 aaKnown RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 LTFP02788 710 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 TUBB4AP04350 444 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SPATA31D3P0C874 917 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 LCP1P13796 627 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PTPN2P17706 415 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ABCB4P21439 1286 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 NOS2P35228 1153 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 GTF2F1P35269 517 aaKnown RBP eCLIP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PCK1P35558 622 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 FLT3P36888 993 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SLC1A1P43005 524 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 YWHAGP61981 247 aaKnown RBP eCLIP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 VEPH1Q14D04 833 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SLC25A52Q3SY17 297 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 CCDC14Q49A88 953 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PABPC1LQ4VXU2 614 aaKnown RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ARSJQ5FYB0 599 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 LRRC38Q5VT99 294 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SYPL2Q5VXT5 272 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 OR6B2Q6IFH4 312 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 C11orf63Q6NUN7 778 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ANKRD54Q6NXT1 300 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 DNAJC24Q6P3W2 148 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ELMSAN1Q6PJG2 1045 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SPATA31D4Q6ZUB0 917 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 HFE2Q6ZVN8 426 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 GAREM2Q75VX8 874 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 STRADAQ7RTN6 431 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 GPR149Q86SP6 731 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 KIAA1328Q86T90 577 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ARFGAP1Q8N6T3 406 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 KIAA1958Q8N8K9 716 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PLPP7Q8NBV4 271 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 JOSD2Q8TAC2 188 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF564Q8TBZ8 553 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 GIPC2Q8TF65 315 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 CLEC4CQ8WTT0 213 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 RXFP2Q8WXD0 754 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 NDRG1Q92597 394 aaKnown RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 CD101Q93033 1021 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PABPC5Q96DU9 382 aaKnown RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SLC39A13Q96H72 371 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 MSLNLQ96KJ4 702 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SEPT5Q99719 369 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 NCAPGQ9BPX3 1015 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 NUP85Q9BW27 656 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SFXN1Q9H9B4 322 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 POPDC2Q9HBU9 364 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF334Q9HCZ1 680 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 OSGEPQ9NPF4 335 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ST7Q9NRC1 585 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ABCC13Q9NSE7 274 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 DNMT3BQ9UBC3 853 aaKnown RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 TRIM10Q9UDY6 481 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 CHORDC1Q9UHD1 332 aaPredicted RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 IP6K2Q9UHH9 426 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 ZMYM5Q9UJ78 669 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 TFR2Q9UP52 801 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 SPTBN5Q9NRC6 3674 aaKnown RBP5.71□□□□□ -1.5
ZEB1-220ENST00000560909 EYSQ5T1H1 3165 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 CLUHO75153 1309 aa5.71□□□□□ -1.5
ZEB1-220ENST00000560909 PRUNE2Q8WUY3 3088 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 CCDC195A0A1B0GUA6 201 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 A0A1W2PQH9 124 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 KCNU1A8MYU2 1149 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 MYO1FO00160 1098 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 GFRA2O00451 464 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 LZTS3O60299 673 aaPredicted RBP5.7□□□□□ -1.5
ZEB1-220ENST00000560909 ZNF500O60304 480 aaPredicted RBP5.7□□□□□ -1.5
ZEB1-220ENST00000560909 GREM1O60565 184 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 XYLBO75191 536 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 LRCH4O75427 683 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 GJB6O95452 261 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 F9P00740 461 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 IGLV3-27P01718 113 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 LRG1P02750 347 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 TCF3P15923 654 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 PDGFRAP16234 1089 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 GPD1P21695 349 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 DDX6P26196 483 aaKnown RBP eCLIP5.7□□□□□ -1.5
ZEB1-220ENST00000560909 CDC25CP30307 473 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 CCR2P41597 374 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 CXCR3P49682 368 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 PEX5P50542 639 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 CDR1P51861 262 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 HDAC4P56524 1084 aa5.7□□□□□ -1.5
ZEB1-220ENST00000560909 ETF1P62495 437 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms