RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TTC34A8MYJ7 566 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 ACKR2O00590 384 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 LDHAP00338 332 aaKnown RBP5.04□□□□□ -1.6
PSMA4-221ENST00000560842 CYP3A4P08684 503 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 PRR35P0CG20 571 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 KELP23276 732 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 ATP5F1P24539 256 aaPredicted RBP5.04□□□□□ -1.6
PSMA4-221ENST00000560842 NDUFS1P28331 727 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 MPGP29372 298 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 IDUAP35475 653 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 HSF1Q00613 529 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 CFHR1Q03591 330 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 DMWDQ09019 674 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 FHL1Q13642 323 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 BLMHQ13867 455 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 FAM110CQ1W6H9 321 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 FAM83BQ5T0W9 1011 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 ZNF626Q68DY1 528 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 LIN54Q6MZP7 749 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 DEF8Q6ZN54 512 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 KRT27Q7Z3Y8 459 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 TFAP2DQ7Z6R9 452 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 YTHDF3Q7Z739 585 aaKnown RBP5.04□□□□□ -1.6
PSMA4-221ENST00000560842 RFX6Q8HWS3 928 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 BCAS4Q8TDM0 211 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 FAR2Q96K12 515 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 EIF3CQ99613 913 aaKnown RBP5.04□□□□□ -1.6
PSMA4-221ENST00000560842 FAM118BQ9BPY3 351 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 SENP7Q9BQF6 1050 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 WACQ9BTA9 647 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 MLXIPLQ9NP71 852 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 PRDM8Q9NQV8 689 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 PDGFCQ9NRA1 345 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 VPS4AQ9UN37 437 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 CNTN6Q9UQ52 1028 aa5.04□□□□□ -1.6
PSMA4-221ENST00000560842 CNTNAP2Q9UHC6 1331 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 E5RJQ4 531 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 LARGE1O95461 756 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 ITGA2BP08514 1039 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 STAT6P42226 847 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 AGTR2P50052 363 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 FOXG1P55316 489 aaPredicted RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 FOXL2P58012 376 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 TLE3Q04726 772 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 CBFBQ13951 182 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 PFKFB3Q16875 520 aaPredicted RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 SUPT20HL1Q3ZLR7 823 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 C10orf62Q5T681 223 aaPredicted RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 MORN5Q5VZ52 161 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 GGT6Q6P531 493 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 SLC44A2Q8IWA5 706 aaPredicted RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 EXD3Q8N9H8 876 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 OSR1Q8TAX0 266 aaPredicted RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 OTUD7AQ8TE49 926 aaPredicted RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 RPL36ALQ969Q0 106 aaKnown RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 NPAS1Q99742 590 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 SH2D3AQ9BRG2 576 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 RTKNQ9BST9 563 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 DDX23Q9BUQ8 820 aaKnown RBP5.03□□□□□ -1.6
PSMA4-221ENST00000560842 TM2D2Q9BX73 214 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 DACT1Q9NYF0 836 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 PCDHB7Q9Y5E2 793 aa5.03□□□□□ -1.6
PSMA4-221ENST00000560842 ZNF521Q96K83 1311 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 CYP3A7-CYP3A51PA0A087WV96 503 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 M0QYT0 321 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 DSCR3O14972 297 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 PEX14O75381 377 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 MOSPD3O75425 235 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 RNF8O76064 485 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 NTN1O95631 604 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 VEGFAP15692 232 aaPredicted RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 CYP3A7P24462 503 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 TACR3P29371 465 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 SOX2P48431 317 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 RPL15P61313 204 aaKnown RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 RBM6P78332 1123 aaKnown RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 ZNF268Q14587 947 aaPredicted RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 KPNB1Q14974 876 aaKnown RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 P3H1Q32P28 736 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 CC2D1BQ5T0F9 858 aaKnown RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 TTC22Q5TAA0 569 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 MIS18BP1Q6P0N0 1132 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 WDR93Q6P2C0 686 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 ATG16L2Q8NAA4 619 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 VPS37AQ8NEZ2 397 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 WIPF2Q8TF74 440 aaPredicted RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 CELF1Q92879 486 aaKnown RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 FCRL5Q96RD9 977 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 VPS16Q9H269 839 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 PABPC3Q9H361 631 aaKnown RBP5.02□□□□□ -1.61
PSMA4-221ENST00000560842 ASNSD1Q9NWL6 643 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 B3GNT3Q9Y2A9 372 aa5.02□□□□□ -1.61
PSMA4-221ENST00000560842 C3orf70A6NLC5 250 aaPredicted RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 SLC38A8A6NNN8 435 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 CNOT3O75175 753 aaKnown RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 KAT7O95251 611 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 PLAUP00749 431 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ENO1P06733 434 aaKnown RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 RPS6KB1P23443 525 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 HOXA7P31268 230 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms