RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ARPP19P56211 112 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 RPL10AP62906 217 aaKnown RBP13.32□□□□□ -0.28
SNX1-211ENST00000560829 HEATR6Q6AI08 1181 aaKnown RBP13.32□□□□□ -0.28
SNX1-211ENST00000560829 PRSS55Q6UWB4 352 aaPredicted RBP13.32□□□□□ -0.28
SNX1-211ENST00000560829 PPP1R21Q6ZMI0 780 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 NECAB2Q7Z6G3 386 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 RNF34Q969K3 372 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 C9orf72Q96LT7 481 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 KLC2Q9H0B6 622 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 GMIPQ9P107 970 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 XPO7Q9UIA9 1087 aaKnown RBP13.32□□□□□ -0.28
SNX1-211ENST00000560829 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
SNX1-211ENST00000560829 NEU3Q9UQ49 428 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 CDY1Q9Y6F8 540 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 VWA8A3KMH1 1905 aa13.32□□□□□ -0.28
SNX1-211ENST00000560829 A0A0A0MRY4 1105 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 WDR27A2RRH5 827 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 KCNU1A8MYU2 1149 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 RASGRF2O14827 1237 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SOD2P04179 222 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 CSF2RAP15509 400 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 TSHRP16473 764 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 NR1D1P20393 614 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SERPINB6P35237 376 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 WDR5P61964 334 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 NRG1Q02297 640 aaPredicted RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 GAD2Q05329 585 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 STAT4Q14765 748 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 PSMD5Q16401 504 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 MANEALQ5VSG8 457 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 PDIK1LQ8N165 341 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SLC39A11Q8N1S5 342 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 UHMK1Q8TAS1 419 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 SLC39A13Q96H72 371 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SPATA13Q96N96 652 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 PRDM12Q9H4Q4 367 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SFMBT1Q9UHJ3 866 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 TLR6Q9Y2C9 796 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 A6NNZ2 444 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 ADAM12O43184 909 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SHOX2O60902 331 aaPredicted RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 BAIAP3O94812 1187 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 AGTP01019 485 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 TPSB2P20231 275 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 DEFB103AP81534 67 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 DUSP4Q13115 394 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 AUHQ13825 339 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 TPSAB1Q15661 275 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 TUBB8Q3ZCM7 444 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 FNBP1LQ5T0N5 605 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 ARTNQ5T4W7 220 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 ZBED8Q8IZ13 594 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 TMEM199Q8N511 208 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 MCUQ8NE86 351 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 CCDC110Q8TBZ0 833 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 FBXO32Q969P5 355 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 P2RY11Q96G91 374 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 ZNF558Q96NG5 402 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 LGMNQ99538 433 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 SEPT5Q99719 369 aaPredicted RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 FERMT1Q9BQL6 677 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 OLA1Q9NTK5 396 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNX1-211ENST00000560829 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 NOVA2Q9UNW9 492 aaKnown RBP13.31□□□□□ -0.28
SNX1-211ENST00000560829 MICAL3Q7RTP6 2002 aa13.31□□□□□ -0.28
SNX1-211ENST00000560829 LTBP2Q14767 1821 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 A0A087WUV0 522 aaPredicted RBP13.3□□□□□ -0.28
SNX1-211ENST00000560829 GOLGA8MH3BSY2 632 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
SNX1-211ENST00000560829 MSI1O43347 362 aaKnown RBP13.3□□□□□ -0.28
SNX1-211ENST00000560829 OPHN1O60890 802 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 PAGE1O75459 146 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 SOAT2O75908 522 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 METTL18O95568 372 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 IVLP07476 585 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 SLC2A3P11169 496 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 LAG3P18627 525 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 MX2P20592 715 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 EPHB2P29323 1055 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 TUFMP49411 452 aaKnown RBP13.3□□□□□ -0.28
SNX1-211ENST00000560829 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 DSG1Q02413 1049 aa13.3□□□□□ -0.28
SNX1-211ENST00000560829 PPIDQ08752 370 aaKnown RBP13.3□□□□□ -0.28
SNX1-211ENST00000560829 GALNT2Q10471 571 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms