RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 OTOP2Q7RTS6 562 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 TRMT1LQ7Z2T5 733 aaKnown RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 MAP7D3Q8IWC1 876 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 TERB1Q8NA31 727 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 PPP1R14CQ8TAE6 165 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 NAT14Q8WUY8 206 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 PRPF31Q8WWY3 499 aaKnown RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 TMEM143Q96AN5 459 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 MIPEPQ99797 713 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 FERMT1Q9BQL6 677 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 C1QTNF1Q9BXJ1 281 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 MRPL4Q9BYD3 311 aaKnown RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 MTIF3Q9H2K0 278 aaKnown RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 RNPEPQ9H4A4 650 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 FAM124BQ9H5Z6 455 aaPredicted RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 PRDM16Q9HAZ2 1276 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 IFT122Q9HBG6 1241 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 S100A14Q9HCY8 104 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 PAK5Q9P286 719 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 PPARGC1AQ9UBK2 798 aaKnown RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 PRPF19Q9UMS4 504 aaKnown RBP8.83□□□□□ -1
CCDC33-209ENST00000560565 CNTN6Q9UQ52 1028 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 TBC1D30Q9Y2I9 924 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 SQORQ9Y6N5 450 aa8.83□□□□□ -1
CCDC33-209ENST00000560565 TRANK1O15050 2925 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 hCG_1818297A0A087WSY0 165 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 SMIM35A0A1B0GVV1 85 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 MBLAC1A4D2B0 266 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 CAPN14A8MX76 684 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 H3BRJ5 948 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 CASQ2O14958 399 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 HNRNPDLO14979 420 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 BAG2O95816 211 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PFKMP08237 780 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 CKBP12277 381 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SELPP16109 830 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 ATF7P17544 494 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 GNA15P30679 374 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PIK3CAP42336 1068 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PHKA2P46019 1235 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 LIG4P49917 911 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SNX16P57768 344 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 NOMO3P69849 1222 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SMAD3P84022 425 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 TMPRSS15P98073 1019 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 CDC16Q13042 620 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SPIDRQ14159 915 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PSMD6Q15008 389 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 GRIK4Q16099 956 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 KYAT1Q16773 422 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 ANKRD20A4Q4UJ75 823 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 ACBD5Q5T8D3 534 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 C16orf89Q6UX73 402 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 RIPOR1Q6ZS17 1223 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 BBS12Q6ZW61 710 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 DEFB128Q7Z7B8 93 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SERINC5Q86VE9 423 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 ZNF410Q86VK4 478 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PDSS2Q86YH6 399 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 RHPN2Q8IUC4 686 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 NUDCD3Q8IVD9 361 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 AHI1Q8N157 1196 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 TTC39CQ8N584 583 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 FBXO36Q8NEA4 188 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SLC35B2Q8TB61 432 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 DCAKDQ8WVC6 231 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 POMGNT1Q8WZA1 660 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 HERVK_113Q902F9 699 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 CDKL2Q92772 493 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 LRGUKQ96M69 825 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 RILPQ96NA2 401 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 POP1Q99575 1024 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 CBWD1Q9BRT8 395 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 LRFN3Q9BTN0 628 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 HEMGNQ9BXL5 484 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 MAK16Q9BXY0 300 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 FZD8Q9H461 694 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PCIF1Q9H4Z3 704 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 RSAD1Q9HA92 442 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 SETD4Q9NVD3 440 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 ARL8BQ9NVJ2 186 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 PRMT7Q9NVM4 692 aaPredicted RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 DNAJC17Q9NVM6 304 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 R3HDM2Q9Y2K5 976 aaKnown RBP8.82□□□□□ -1
CCDC33-209ENST00000560565 MAD1L1Q9Y6D9 718 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 CHD7Q9P2D1 2997 aa8.82□□□□□ -1
CCDC33-209ENST00000560565 TMEM191CA6NGB0 347 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 ZBBXA8MT70 800 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 APOC4-APOC2K7ER74 178 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 ACKR2O00590 384 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 TREHO43280 583 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 DENRO43583 198 aaKnown RBP8.81□□□□□ -1
CCDC33-209ENST00000560565 CLASP2O75122 1294 aaKnown RBP8.81□□□□□ -1
CCDC33-209ENST00000560565 PARNO95453 639 aaKnown RBP8.81□□□□□ -1
CCDC33-209ENST00000560565 IFNB1P01574 187 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 APOC2P02655 101 aa8.81□□□□□ -1
CCDC33-209ENST00000560565 PRKCBP05771 671 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms