RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NOVA2Q9UNW9 492 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 SCML2Q9UQR0 700 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 SHROOM3Q8TF72 1996 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 EYSQ5T1H1 3165 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 ABHD14A-ACY1A0A1B0GW23 586 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 DCLK1O15075 740 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 F9P00740 461 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 HAPLN1P10915 354 aaPredicted RBP11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 ACTN2P35609 894 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 MAGEA4P43358 317 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 ELAVL2Q12926 359 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 SEMA3BQ13214 749 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 CCDC38Q502W7 563 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 HEATR6Q6AI08 1181 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 C14orf80Q86SX3 495 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 MON1AQ86VX9 555 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 PPIL6Q8IXY8 311 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 TMEM199Q8N511 208 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 ZCCHC9Q8N567 271 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 CCHCR1Q8TD31 782 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 ETNK1Q9HBU6 452 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 TBK1Q9UHD2 729 aa11.23□□□□□ -0.61
SNRPA1-211ENST00000560433 CHD9Q3L8U1 2897 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 GOLGA8KD6RF30 607 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 H7C4K7 107 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 TTC4O95801 387 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 IGLV3-25P01717 112 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 APRTP07741 180 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 GRIA1P42261 906 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 OLIG2Q13516 323 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 EIF4EBP2Q13542 120 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 BBS9Q3SYG4 887 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 SLC45A4Q5BKX6 768 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 C10orf120Q5SQS8 335 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 ARHGAP36Q6ZRI8 547 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 VPS52Q8N1B4 723 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 BBOF1Q8ND07 529 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 TTC16Q8NEE8 873 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 SPPL2BQ8TCT7 592 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 NTAN1Q96AB6 310 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 P2RY11Q96G91 374 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 FCRL2Q96LA5 508 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 SLC9A7Q96T83 725 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 TRIM56Q9BRZ2 755 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 FRMD8P1Q9BZ68 369 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 FBXO44Q9H4M3 255 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 RABEP2Q9H5N1 569 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 CYP4F11Q9HBI6 524 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 MTRRQ9UBK8 725 aa11.22□□□□□ -0.61
SNRPA1-211ENST00000560433 REV3LO60673 3130 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 BCLAF3A2AJT9 711 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SCAMP3O14828 347 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 CCR1P32246 355 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 IRAK1P51617 712 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 IFI35P80217 286 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 CAV1Q03135 178 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 MORF4L2Q15014 288 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 TERF2Q15554 542 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 LRIG3Q6UXM1 1119 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SPRED2Q7Z698 418 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SLC39A11Q8N1S5 342 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 HTR3CQ8WXA8 447 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 ATP6V1G3Q96LB4 118 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 ZNF558Q96NG5 402 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 OLFM3Q96PB7 478 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SMOC2Q9H3U7 446 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 RC3H2Q9HBD1 1191 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SPTBN5Q9NRC6 3674 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 GREB1Q4ZG55 1949 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SLC38A8A6NNN8 435 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 KIAA0355O15063 1070 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 EFEMP2O95967 443 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SOD2P04179 222 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 NUDT17P0C025 328 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SSTR1P30872 391 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 MAGEA11P43364 429 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 NR2C2P49116 596 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 LMAN1P49257 510 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 MAGOHP61326 146 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SCAPQ12770 1279 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 HIF1AQ16665 826 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SLC8B1Q6J4K2 584 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 VSIG1Q86XK7 387 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 PSTKQ8IV42 348 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 IGDCC3Q8IVU1 814 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 SCML4Q8N228 414 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 FAM76AQ8TAV0 307 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 VPS37BQ9H9H4 285 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 RRN3Q9NYV6 651 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 VANGL2Q9ULK5 521 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 ZMYND8Q9ULU4 1186 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 HS3ST4Q9Y661 456 aa11.21□□□□□ -0.61
SNRPA1-211ENST00000560433 DFFAO00273 331 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms