RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 EPB41L4BQ9H329 900 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 MAGED2Q9UNF1 606 aaPredicted RBP24.28■■□□□ 1.48
TM2D3-209ENST00000560013 SHOC2Q9UQ13 582 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 FARP1Q9Y4F1 1045 aaPredicted RBP24.28■■□□□ 1.48
TM2D3-209ENST00000560013 SNX10Q9Y5X0 201 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 KCNU1A8MYU2 1149 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 CEP128Q6ZU80 1094 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 PDZD4Q76G19 769 aaPredicted RBP24.28■■□□□ 1.48
TM2D3-209ENST00000560013 TRMT10CQ7L0Y3 403 aaKnown RBP24.28■■□□□ 1.48
TM2D3-209ENST00000560013 PPIL6Q8IXY8 311 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 LRRN4Q8WUT4 740 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 TFB1MQ8WVM0 346 aaKnown RBP24.28■■□□□ 1.48
TM2D3-209ENST00000560013 PWWP2AQ96N64 755 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 ZBED2Q9BTP6 218 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 MRPL17Q9NRX2 175 aaKnown RBP24.28■■□□□ 1.48
TM2D3-209ENST00000560013 PAK5Q9P286 719 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 STK39Q9UEW8 545 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 INSL6Q9Y581 213 aa24.28■■□□□ 1.48
TM2D3-209ENST00000560013 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.27■■□□□ 1.48
TM2D3-209ENST00000560013 PAGE1O75459 146 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 ZDHHC11BP0C7U3 371 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 SLC2A3P11169 496 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 EPHB2P29323 1055 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 RAB33AQ14088 237 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 TMEM240Q5SV17 173 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 CCDC33Q8N5R6 958 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 CPT1BQ92523 772 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 SLC39A13Q96H72 371 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 UBE2OQ9C0C9 1292 aaKnown RBP24.27■■□□□ 1.48
TM2D3-209ENST00000560013 SIK2Q9H0K1 926 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 CYP4F11Q9HBI6 524 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 PRDM10Q9NQV6 1147 aa24.27■■□□□ 1.48
TM2D3-209ENST00000560013 EFEMP1Q12805 493 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 PDK1Q15118 436 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 DENND2CQ68D51 928 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 HEATR6Q6AI08 1181 aaKnown RBP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 HOOK3Q86VS8 718 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 OR2W6PQ8NHA6 318 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 PRCCQ92733 491 aaPredicted RBP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 CDC42EP4Q9H3Q1 356 aaKnown RBP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 DNAJC17Q9NVM6 304 aaKnown RBP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 CXXC1Q9P0U4 656 aaPredicted RBP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 RAD54BQ9Y620 910 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 SMAPO00193 183 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 RIPK2O43353 540 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 FGF18O76093 207 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 DNAJB2P25686 324 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 TBX4P57082 545 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 SLC29A2Q14542 456 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 CEP85LQ5SZL2 805 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 PSRC1Q6PGN9 363 aaPredicted RBP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 C4orf22Q6V702 233 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 RELL1Q8IUW5 271 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 GPR65Q8IYL9 337 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 NAT8LQ8N9F0 302 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 AUTS2Q8WXX7 1259 aa24.26■■□□□ 1.47
TM2D3-209ENST00000560013 RBM15Q96T37 977 aaKnown RBP eCLIP24.26■■□□□ 1.47
TM2D3-209ENST00000560013 RNF40O75150 1001 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 TBX18O95935 607 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 NUDT17P0C025 328 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 LINC00271P0C7V0 271 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 SRGAP2BP0DMP2 458 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 HTR7P34969 479 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 EIF3BP55884 814 aaKnown RBP24.25■■□□□ 1.47
TM2D3-209ENST00000560013 BASP1P80723 227 aaKnown RBP24.25■■□□□ 1.47
TM2D3-209ENST00000560013 C10orf120Q5SQS8 335 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 C7orf61Q8IZ16 206 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 TAB3Q8N5C8 712 aaPredicted RBP24.25■■□□□ 1.47
TM2D3-209ENST00000560013 FCRL2Q96LA5 508 aaPredicted RBP24.25■■□□□ 1.47
TM2D3-209ENST00000560013 LGMNQ99538 433 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.25■■□□□ 1.47
TM2D3-209ENST00000560013 FNIP2Q9P278 1114 aa24.25■■□□□ 1.47
TM2D3-209ENST00000560013 PPP1R12AO14974 1030 aaPredicted RBP24.24■■□□□ 1.47
TM2D3-209ENST00000560013 GCATO75600 419 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 ALDH1A3P47895 512 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 HTR3CQ8WXA8 447 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 CLP1Q92989 425 aaKnown RBP24.24■■□□□ 1.47
TM2D3-209ENST00000560013 MARCH2Q9P0N8 246 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 C5orf60A6NFR6 353 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 GOLGA8KD6RF30 607 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 POLR3GO15318 223 aaPredicted RBP24.24■■□□□ 1.47
TM2D3-209ENST00000560013 NCAM2O15394 837 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 MOCS2O96007 188 aaPredicted RBP24.24■■□□□ 1.47
TM2D3-209ENST00000560013 CSH1P0DML2 217 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 CSH2P0DML3 217 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 SERPINB6P35237 376 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 ZNF844Q08AG5 666 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 TRIP4Q15650 581 aaPredicted RBP24.24■■□□□ 1.47
TM2D3-209ENST00000560013 ANKRD22Q5VYY1 191 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 NETO2Q8NC67 525 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 PDZD8Q8NEN9 1154 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 OVCA2Q8WZ82 227 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 C1orf74Q96LT6 269 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 PRDM12Q9H4Q4 367 aa24.24■■□□□ 1.47
TM2D3-209ENST00000560013 NUP205Q92621 2012 aa24.23■■□□□ 1.47
TM2D3-209ENST00000560013 TLR5O60602 858 aa24.23■■□□□ 1.47
TM2D3-209ENST00000560013 VAV1P15498 845 aa24.23■■□□□ 1.47
TM2D3-209ENST00000560013 NRG1Q02297 640 aaPredicted RBP24.23■■□□□ 1.47
TM2D3-209ENST00000560013 IFFO1Q0D2I5 559 aa24.23■■□□□ 1.47
TM2D3-209ENST00000560013 PRKD1Q15139 912 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms