RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 KRT3P12035 628 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 SKILP12757 684 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 SLC6A4P31645 630 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 CASP14P31944 242 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 SULT1E1P49888 294 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 SATB1Q01826 763 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 NHLH1Q02575 133 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 PKN3Q6P5Z2 889 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 PHLDB2Q86SQ0 1253 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 ACDQ96AP0 544 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 FAM126AQ9BYI3 521 aaPredicted RBP14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 WDCPQ9H6R7 721 aa14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 METTL5Q9NRN9 209 aaKnown RBP14.18□□□□□ -0.14
CHRNB4-204ENST00000559849 WDR87Q6ZQQ6 2873 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 TYW5A2RUC4 315 aaKnown RBP14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 HOXD9P28356 352 aaPredicted RBP14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 KIR2DL1P43626 348 aaPredicted RBP14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 NRLP54845 237 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 SEC13P55735 322 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 DEUP1Q05D60 604 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 TRIM14Q14142 442 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 HSF5Q4G112 596 aaPredicted RBP14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 TDRD12Q587J7 1177 aaKnown RBP14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 MS4A13Q5J8X5 152 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 C10orf76Q5T2E6 689 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 HGSNATQ68CP4 663 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 SYT13Q7L8C5 426 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 SFTPA1Q8IWL2 248 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 MCOLN2Q8IZK6 566 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 SELENOOQ9BVL4 669 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 PIGVQ9NUD9 493 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 CALCOCO1Q9P1Z2 691 aa14.17□□□□□ -0.14
CHRNB4-204ENST00000559849 SIGLEC16A6NMB1 481 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 SERPING1P05155 500 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 PDGFRAP16234 1089 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TFE3P19532 575 aaPredicted RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 CXCR3P49682 368 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 BRMS1LQ5PSV4 323 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 EMC10Q5UCC4 262 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 OTUD1Q5VV17 481 aaPredicted RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TSSK4Q6SA08 328 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 SARM1Q6SZW1 724 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 VPS36Q86VN1 386 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 EMC1Q8N766 993 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 ZNF557Q8N988 423 aaPredicted RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 CFAP57Q96MR6 1250 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TBCBQ99426 244 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 ADAM33Q9BZ11 813 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 C2orf42Q9NWW7 574 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TAS2R14Q9NYV8 317 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 CLEC4EQ9ULY5 219 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 SLC8A2Q9UPR5 921 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 PIEZO1Q92508 2521 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 ZFHX2Q9C0A1 2572 aaPredicted RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TMCO5BA8MYB1 307 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 PRRT4C9JH25 899 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 DDX3XO00571 662 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 RRP9O43818 475 aaKnown RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TBL1XO60907 577 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 ENDOD1O94919 500 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 SDC4P31431 198 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 RFC1P35251 1148 aaPredicted RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TIE1P35590 1138 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 BNIPLQ7Z465 357 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 CHSY1Q86X52 802 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 CAMKK1Q8N5S9 505 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 IL17RCQ8NAC3 791 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 HJURPQ8NCD3 748 aaPredicted RBP14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 RXFP2Q8WXD0 754 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 TRIM5Q9C035 493 aa14.16□□□□□ -0.14
CHRNB4-204ENST00000559849 ANTXRLA6NF34 631 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 C2CD4BA6NLJ0 364 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 K7ESF4 209 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 RTN2O75298 545 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 FTLP02792 175 aaPredicted RBP14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 TPM1P09493 284 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 TACR2P21452 398 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 HOXA6P31267 233 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 HNRNPH3P31942 346 aaKnown RBP14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 SGSHP51688 502 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 RNF43Q68DV7 783 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 DNAJC24Q6P3W2 148 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 WDR59Q6PJI9 974 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 ZC3H14Q6PJT7 736 aaKnown RBP14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 ALLCQ8N6M5 410 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 JOSD2Q8TAC2 188 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 NELL1Q92832 810 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 TKTL2Q9H0I9 626 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 RBSNQ9H1K0 784 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 ARHGEF38Q9NXL2 777 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 ADAMTS1Q9UHI8 967 aa14.15□□□□□ -0.14
CHRNB4-204ENST00000559849 MMP17Q9ULZ9 603 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms