RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SH3BP1Q9Y3L3 701 aa9.39□□□□□ -0.91
HMG20A-209ENST00000559728 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
HMG20A-209ENST00000559728 SCINQ9Y6U3 715 aa9.39□□□□□ -0.91
HMG20A-209ENST00000559728 DUSP10Q9Y6W6 482 aa9.39□□□□□ -0.91
HMG20A-209ENST00000559728 BDP1A6H8Y1 2624 aa9.39□□□□□ -0.91
HMG20A-209ENST00000559728 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
HMG20A-209ENST00000559728 KIF26AQ9ULI4 1882 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 TCF20Q9UGU0 1960 aaKnown RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 SYNJ2BP-COX16A0A087WUM0 186 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ANTXRLA6NF34 631 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 PJA2O43164 708 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ACSL4O60488 711 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 LRCH4O75427 683 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 PENKP01210 267 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 IL1R2P27930 398 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ADRA1BP35368 520 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 CYLC1P35663 651 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 GGCXP38435 758 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 SOX9P48436 509 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 IRAK1P51617 712 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 KPNA1P52294 538 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 RUNX3Q13761 415 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 PDGFRLQ15198 375 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 C5orf22Q49AR2 442 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 MS4A13Q5J8X5 152 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 BRMS1LQ5PSV4 323 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 LY6G5CQ5SRR4 150 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 C10orf76Q5T2E6 689 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 MANEALQ5VSG8 457 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 FYB2Q5VWT5 728 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 TXNRD3NBQ6F5E7 133 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 RFWD3Q6PCD5 774 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 DCUN1D2Q6PH85 259 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 C12orf40Q86WS4 652 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ETFBKMTQ8IXQ9 262 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 CPXM2Q8N436 756 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 CCDC185Q8N715 623 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 NIPA2Q8N8Q9 360 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ZNF564Q8TBZ8 553 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 EZH1Q92800 747 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 EDAQ92838 391 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 DNASE1L2Q92874 299 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 IRF7Q92985 503 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 OTUB2Q96DC9 234 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ZNF830Q96NB3 372 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 DCLK3Q9C098 648 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 TKTL2Q9H0I9 626 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 FBRSL1Q9HCM7 1045 aaKnown RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 MRPL47Q9HD33 250 aaKnown RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 THG1LQ9NWX6 298 aaKnown RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 MARK1Q9P0L2 795 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 COX16Q9P0S2 106 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 TBC1D14Q9P2M4 693 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 UVRAGQ9P2Y5 699 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 FBXO10Q9UK96 956 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 CLEC4EQ9ULY5 219 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 HS3ST4Q9Y661 456 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 NUP210Q8TEM1 1887 aaPredicted RBP9.38□□□□□ -0.91
HMG20A-209ENST00000559728 MYO16Q9Y6X6 1858 aa9.38□□□□□ -0.91
HMG20A-209ENST00000559728 BTNL10A8MVZ5 291 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 PI4K2BG5E9Z4 385 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 FAM72CH0Y354 149 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 DLL1O00548 723 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 TRDMT1O14717 391 aaKnown RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 TRIM24O15164 1050 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 ARHGAP6O43182 974 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 HOXC11O43248 304 aaPredicted RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 DCXO43602 365 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 PAGE1O75459 146 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 F9P00740 461 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 TACR2P21452 398 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 PSMA2P25787 234 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 CCR1P32246 355 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 GBP1P32455 592 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 GJA4P35212 333 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 OPRD1P41143 372 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 ARHGAP25P42331 645 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 SLC6A11P48066 632 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 IFNAR2P48551 515 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 HARS2P49590 506 aaKnown RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 VAV2P52735 878 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 MLLT6P55198 1093 aaPredicted RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 SLC25A11Q02978 314 aaKnown RBP9.37□□□□□ -0.91
HMG20A-209ENST00000559728 SCAPQ12770 1279 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 FZD5Q13467 585 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 CA9Q16790 459 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 CDO1Q16878 200 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 ITPRIPL2Q3MIP1 535 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 SLC44A4Q53GD3 710 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 ADGRF1Q5T601 910 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 FAM72AQ5TYM5 149 aa9.37□□□□□ -0.91
HMG20A-209ENST00000559728 RAP1GAP2Q684P5 730 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms