RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RBM12Q9NTZ6 932 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 SLC12A6Q9UHW9 1150 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 FBXO10Q9UK96 956 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 I6L893 689 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 NCAM2O15394 837 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 CACNG3O60359 315 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 TULP3O75386 442 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 EGFP01133 1207 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 MYBL1P10243 752 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 ABCB4P21439 1286 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 EIF2DP41214 584 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 SGSHP51688 502 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 OGDHQ02218 1023 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 GRSF1Q12849 480 aaKnown RBP eCLIP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 CCINQ13939 588 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 MPPE1Q53F39 396 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 DCUN1D2Q6PH85 259 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 PHTF2Q8N3S3 785 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 DDI1Q8WTU0 396 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 TRIM11Q96F44 468 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 CCDC42Q96M95 316 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 PNKPQ96T60 521 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 DDX50Q9BQ39 737 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 TKTL2Q9H0I9 626 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 THAP2Q9H0W7 228 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 DEF6Q9H4E7 631 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 ARHGEF38Q9NXL2 777 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 MYO1AQ9UBC5 1043 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 CLEC4EQ9ULY5 219 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 TMEM191CA6NGB0 347 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 AKR1B10O60218 316 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 CYBBP04839 570 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 CISD3P0C7P0 127 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 DRD1P21728 446 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 RDXP35241 583 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 ZNF143P52747 638 aaPredicted RBP21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 GALCP54803 685 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 CDO1Q16878 200 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 MS4A13Q5J8X5 152 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 BRMS1LQ5PSV4 323 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 RAP1GAP2Q684P5 730 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 SND1Q7KZF4 910 aaKnown RBP eCLIP21.03■□□□□ 0.962e-6■■■■□ 24.8
TSPAN3-207ENST00000559494 STRADAQ7RTN6 431 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 SFTPA1Q8IWL2 248 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 EXOC4Q96A65 974 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 XPO6Q96QU8 1125 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 PRMT1Q99873 361 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 TRIM7Q9C029 511 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 TMPRSS4Q9NRS4 437 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 TMEM51Q9NW97 253 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 DEC1Q9P2X7 70 aa21.03■□□□□ 0.96
TSPAN3-207ENST00000559494 A0A0A0MRY4 1105 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 ANTXRLA6NF34 631 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 PAGE1O75459 146 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 TACR2P21452 398 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 RPS9P46781 194 aaKnown RBP21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 HDAC4P56524 1084 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 DGKKQ5KSL6 1271 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 FAM131BQ86XD5 332 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 FAM172AQ8WUF8 416 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 PANX2Q96RD6 677 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 IRX2Q9BZI1 471 aaPredicted RBP21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 ARHGEF4Q9NR80 690 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 SPTLC3Q9NUV7 552 aa21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 DNAJC17Q9NVM6 304 aaKnown RBP21.02■□□□□ 0.95
TSPAN3-207ENST00000559494 ANKRD62A6NC57 917 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 K7EQS6 105 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 CCP110O43303 1012 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 CYP1A2P05177 515 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 HOXD9P28356 352 aaPredicted RBP21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 KDSRQ06136 332 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 GAS6Q14393 721 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 CHSY1Q86X52 802 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 LGI2Q8N0V4 545 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 SPC24Q8NBT2 197 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 ARHGEF26Q96DR7 871 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 PRICKLE1Q96MT3 831 aaPredicted RBP21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 CNPY3Q9BT09 278 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 PACSIN1Q9BY11 444 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 SNX10Q9Y5X0 201 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 HS3ST4Q9Y661 456 aa21.01■□□□□ 0.95
TSPAN3-207ENST00000559494 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21■□□□□ 0.95
TSPAN3-207ENST00000559494 TBL1XO60907 577 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 KAT7O95251 611 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 APODP05090 189 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 GRIA2P42262 883 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 RPS24P62847 133 aaKnown RBP21■□□□□ 0.95
TSPAN3-207ENST00000559494 ZNF252P-AS1Q0IIN9 211 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 AUHQ13825 339 aaKnown RBP21■□□□□ 0.95
TSPAN3-207ENST00000559494 LRRC32Q14392 662 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 MPP7Q5T2T1 576 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 RNF43Q68DV7 783 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 GRAMD4Q6IC98 578 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 Q6ZS52 159 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 C14orf80Q86SX3 495 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 CFAP52Q8N1V2 620 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 SIK2Q9H0K1 926 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 CHRDQ9H2X0 955 aa21■□□□□ 0.95
TSPAN3-207ENST00000559494 MRPL47Q9HD33 250 aaKnown RBP21■□□□□ 0.95
TSPAN3-207ENST00000559494 STIM2Q9P246 746 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms