RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 EFSO43281 561 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 TACC1O75410 805 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 AP1G2O75843 785 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CENPBP07199 599 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 ITGA2BP08514 1039 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 TRIM21P19474 475 aaKnown RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 DDIT3P35638 169 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 PRPHP41219 470 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 SKIDA1Q1XH10 827 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 MANEAQ5SRI9 462 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CLEC18BQ6UXF7 455 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 RBM44Q6ZP01 1051 aaKnown RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CHST9Q7L1S5 443 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 KANSL1Q7Z3B3 1105 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CLEC14AQ86T13 490 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 PRPF39Q86UA1 669 aaKnown RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 IQCHQ86VS3 1027 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 NECAB1Q8N987 351 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CLEC18CQ8NCF0 446 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 OR14C36Q8NHC7 312 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 SPATA20Q8TB22 786 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 IFI44Q8TCB0 444 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 MRPL45Q9BRJ2 306 aaKnown RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 MMTAG2Q9BU76 263 aaKnown RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 B3GNT5Q9BYG0 378 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 TMEM245Q9H330 911 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 DPEP3Q9H4B8 488 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 PDE11AQ9HCR9 933 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 TMEM30AQ9NV96 361 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 GEMIN8Q9NWZ8 242 aaKnown RBP10.14□□□□□ -0.79
SMAD3-211ENST00000559460 ANAPC2Q9UJX6 822 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 FZD4Q9ULV1 537 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 KNL1Q8NG31 2342 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 NOTCH2Q04721 2471 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CKAP5Q14008 2032 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 UBE4BO95155 1302 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 ANKRD17O75179 2603 aaKnown RBP10.13□□□□□ -0.79
SMAD3-211ENST00000559460 CREBBPQ92793 2442 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3DA0A087WVF3 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3IA0A087WXS9 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3EA0A087X179 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3KA0A087X1G2 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3FA6NER0 549 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-211ENST00000559460 NEMP2A6NFY4 417 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3LB9A6J9 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 STC2O76061 302 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 AGFG2O95081 481 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 HMBSP08397 361 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3HP0C7X1 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 RARGP13631 454 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 CORO1AP31146 461 aaKnown RBP10.13□□□□□ -0.79
SMAD3-211ENST00000559460 CASRP41180 1078 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 ZNF131P52739 623 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 WNT7BP56706 349 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 COG7P83436 770 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 PDE4CQ08493 712 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 SURF1Q15526 300 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBR1Q16650 682 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 DUOXA2Q1HG44 320 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 HYIQ5T013 277 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3GQ6DHY5 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3CQ6IPX1 549 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 KLHDC10Q6PID8 442 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 SND1Q7KZF4 910 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMAD3-211ENST00000559460 LIMS2Q7Z4I7 341 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 C14orf80Q86SX3 495 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TBC1D3Q8IZP1 549 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-211ENST00000559460 SYCP3Q8IZU3 236 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 AHI1Q8N157 1196 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 C4orf32Q8N8J7 132 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TPCN2Q8NHX9 752 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 CALML4Q96GE6 196 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 TNIP3Q96KP6 325 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 CDK5RAP1Q96SZ6 601 aaKnown RBP10.13□□□□□ -0.79
SMAD3-211ENST00000559460 DUSP23Q9BVJ7 150 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 NEUROG2Q9H2A3 272 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 ADNPQ9H2P0 1102 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 SYNDIG1Q9H7V2 258 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 EBF2Q9HAK2 575 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 KRT82Q9NSB4 513 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 NCKIPSDQ9NZQ3 722 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 RASAL2Q9UJF2 1139 aa10.13□□□□□ -0.79
SMAD3-211ENST00000559460 CCDC187A0A096LP49 1063 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 FAM92AA1XBS5 289 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 GOLGA8IPA6NC78 632 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 GOLGA8JA6NMD2 632 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 WNT9AO14904 365 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 MDM4O15151 490 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 MID1O15344 667 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 JAK2O60674 1132 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 DLDP09622 509 aaKnown RBP10.12□□□□□ -0.79
SMAD3-211ENST00000559460 FAM163BP0C2L3 166 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 RALAP11233 206 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 POLR2EP19388 210 aaKnown RBP10.12□□□□□ -0.79
SMAD3-211ENST00000559460 DGKAP23743 735 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 ELAVL4P26378 380 aaKnown RBP10.12□□□□□ -0.79
SMAD3-211ENST00000559460 NUDT1P36639 197 aa10.12□□□□□ -0.79
SMAD3-211ENST00000559460 CST6Q15828 149 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms