RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 CHST9Q7L1S5 443 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 ARHGEF19Q8IW93 802 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 UNC45BQ8IWX7 931 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.55■□□□□ 0.08
LRRC28-213ENST00000559399 CLEC4CQ8WTT0 213 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 CYB5D2Q8WUJ1 264 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 DNASE2BQ8WZ79 361 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 NUP58Q9BVL2 599 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 ADAM33Q9BZ11 813 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 IRX2Q9BZI1 471 aaPredicted RBP15.55■□□□□ 0.08
LRRC28-213ENST00000559399 ZDHHC5Q9C0B5 715 aa15.55■□□□□ 0.08
LRRC28-213ENST00000559399 CNOT1A5YKK6 2376 aaKnown RBP15.55■□□□□ 0.08
LRRC28-213ENST00000559399 A0A1B0GTW7 788 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 SPAARA0A1B0GVQ0 90 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 C1QTNF9BB2RNN3 333 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 BIN1O00499 593 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 IRAK2O43187 625 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 TOP3BO95985 862 aaKnown RBP15.54■□□□□ 0.08
LRRC28-213ENST00000559399 C1QTNF9P0C862 333 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 HLA-EP13747 358 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 SGSHP51688 502 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 TBX4P57082 545 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 GRIK2Q13002 908 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 PAK1Q13153 545 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 SLC14A1Q13336 389 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 CAMK2GQ13555 558 aaPredicted RBP15.54■□□□□ 0.08
LRRC28-213ENST00000559399 ADIPOR2Q86V24 386 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 TRIM59Q8IWR1 403 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 ZCCHC9Q8N567 271 aaKnown RBP15.54■□□□□ 0.08
LRRC28-213ENST00000559399 ZNF557Q8N988 423 aaPredicted RBP15.54■□□□□ 0.08
LRRC28-213ENST00000559399 EHBP1Q8NDI1 1231 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 MIS12Q9H081 205 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 MIR1-1HGQ9H1L0 117 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 TMEM245Q9H330 911 aa15.54■□□□□ 0.08
LRRC28-213ENST00000559399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.54■□□□□ 0.08
LRRC28-213ENST00000559399 KMT2BQ9UMN6 2715 aaPredicted RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 ZFHX4Q86UP3 3567 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 TYW5A2RUC4 315 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 SART1O43290 800 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 ACSL4O60488 711 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 TBL1XO60907 577 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 CALCAP01258 141 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 AFPP02771 609 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 ATP5BP06576 529 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 DLDP09622 509 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 KRT5P13647 590 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 CD59P13987 128 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 MARSP56192 900 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 STX17P56962 302 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 KCNH2Q12809 1159 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 HNRNPDQ14103 355 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 PTPRNQ16849 979 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 PIK3R6Q5UE93 754 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 DCAF12L1Q5VU92 463 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 MBLAC2Q68D91 279 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 RFWD3Q6PCD5 774 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 KIAA0907Q7Z7F0 614 aaPredicted RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 HJURPQ8NCD3 748 aaPredicted RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 DQX1Q8TE96 717 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 AZIN2Q96A70 460 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 KREMEN1Q96MU8 473 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 SERPINB11Q96P15 392 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 DDX50Q9BQ39 737 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 SCNM1Q9BWG6 230 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 INTS2Q9H0H0 1204 aaKnown RBP15.53■□□□□ 0.08
LRRC28-213ENST00000559399 PCED1AQ9H1Q7 454 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 LHX5Q9H2C1 402 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 FBRSQ9HAH7 460 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 ST7Q9NRC1 585 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 MYOFQ9NZM1 2061 aa15.53■□□□□ 0.08
LRRC28-213ENST00000559399 CACNA1BQ00975 2339 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 GOLGA6L7A0A1B0GV03 622 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 METTL12A8MUP2 240 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 GJB3O75712 270 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 POLR2EP19388 210 aaKnown RBP15.52■□□□□ 0.08
LRRC28-213ENST00000559399 SLC6A4P31645 630 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 CD70P32970 193 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 RDXP35241 583 aaKnown RBP15.52■□□□□ 0.08
LRRC28-213ENST00000559399 NNTQ13423 1086 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 FAM124AQ86V42 546 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 MFN1Q8IWA4 741 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 ZNF366Q8N895 744 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 WFDC5Q8TCV5 224 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 FAM149B1Q96BN6 582 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 PRICKLE1Q96MT3 831 aaPredicted RBP15.52■□□□□ 0.08
LRRC28-213ENST00000559399 TRIM62Q9BVG3 475 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 CNTN6Q9UQ52 1028 aa15.52■□□□□ 0.08
LRRC28-213ENST00000559399 THADAQ6YHU6 1953 aa15.52■□□□□ 0.07
LRRC28-213ENST00000559399 PLXND1Q9Y4D7 1925 aa15.52■□□□□ 0.07
LRRC28-213ENST00000559399 H0Y626 953 aa15.51■□□□□ 0.07
LRRC28-213ENST00000559399 BCAT2O15382 392 aaPredicted RBP15.51■□□□□ 0.07
LRRC28-213ENST00000559399 MED7O43513 233 aa15.51■□□□□ 0.07
LRRC28-213ENST00000559399 HYAL3O43820 417 aaPredicted RBP15.51■□□□□ 0.07
LRRC28-213ENST00000559399 TRIM16O95361 564 aa15.51■□□□□ 0.07
LRRC28-213ENST00000559399 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
LRRC28-213ENST00000559399 FYNP06241 537 aa15.51■□□□□ 0.07
LRRC28-213ENST00000559399 C7P10643 843 aa15.51■□□□□ 0.07
LRRC28-213ENST00000559399 GPD2P43304 727 aa15.51■□□□□ 0.07
LRRC28-213ENST00000559399 ACADSBP45954 432 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms