RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 MLLT6P55198 1093 aaPredicted RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 PPP2R5EQ16537 467 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 FAM72AQ5TYM5 149 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 PIK3R6Q5UE93 754 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 FAM72DQ6L9T8 149 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 FAM72BQ86X60 149 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 NPAS3Q8IXF0 933 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 DEFB123Q8N688 67 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 ACTRT1Q8TDG2 376 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 CAPZA3Q96KX2 299 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 RIPOR3Q96MK2 946 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 ZNF670Q9BS34 389 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 CALN1Q9BXU9 219 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 SMG9Q9H0W8 520 aaKnown RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 SNX10Q9Y5X0 201 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 HS3ST4Q9Y661 456 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 hCG_1818297A0A087WSY0 165 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 WEE1P30291 646 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 CORO1AP31146 461 aaKnown RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 NRG1Q02297 640 aaPredicted RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 MMRN1Q13201 1228 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 TFDP3Q5H9I0 405 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 ACBD5Q5T8D3 534 aaPredicted RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 DENND1CQ8IV53 801 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 SMRP1Q8NCR6 262 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 FGF13Q92913 245 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 USP13Q92995 863 aaPredicted RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 FAF2Q96CS3 445 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 OSBPL8Q9BZF1 889 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 DCLK3Q9C098 648 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 SIK2Q9H0K1 926 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 TDP1Q9NUW8 608 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 CWC15Q9P013 229 aaKnown RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 RCOR3Q9P2K3 495 aaPredicted RBP18.71■□□□□ 0.59
CLPX-203ENST00000558958 RNF14Q9UBS8 474 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 CCL26Q9Y258 94 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 EFR3BQ9Y2G0 817 aa18.71■□□□□ 0.59
CLPX-203ENST00000558958 LEFTY2O00292 366 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 CREB3O43889 395 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 ACSL4O60488 711 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 PRAMEF12O95522 483 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 FGGP02679 453 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 GGCXP38435 758 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 ARL4AP40617 200 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 MTHFRP42898 656 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 SLC11A2P49281 568 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 ZNF135P52742 658 aaPredicted RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 LLGL1Q15334 1064 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 MS4A13Q5J8X5 152 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 ARTNQ5T4W7 220 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 Q6ZNB5 142 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 GET4Q7L5D6 327 aaPredicted RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 DDX42Q86XP3 938 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLPX-203ENST00000558958 SLC13A5Q86YT5 568 aaPredicted RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 ARID3BQ8IVW6 561 aaPredicted RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 ZSCAN18Q8TBC5 510 aaPredicted RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 SH3RF2Q8TEC5 729 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 CSPG4P5Q96PW8 444 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 PRMT1Q99873 361 aaKnown RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 HERPUD2Q9BSE4 406 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 HEMGNQ9BXL5 484 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 GDE1Q9NZC3 331 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 CFAP97Q9P2B7 532 aa18.7■□□□□ 0.58
CLPX-203ENST00000558958 AGO1Q9UL18 857 aaKnown RBP18.7■□□□□ 0.58
CLPX-203ENST00000558958 SPTBN5Q9NRC6 3674 aaKnown RBP18.69■□□□□ 0.58
CLPX-203ENST00000558958 H3BRJ5 948 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 PGRMC1O00264 195 aaKnown RBP18.69■□□□□ 0.58
CLPX-203ENST00000558958 LRIG2O94898 1065 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 LATS1O95835 1130 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 KRT10P13645 584 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 FOSL2P15408 326 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 TCF3P15923 654 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 GOT1P17174 413 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 HCAR3P49019 387 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 CCDC85BQ15834 202 aaPredicted RBP18.69■□□□□ 0.58
CLPX-203ENST00000558958 WHAMMP3Q1A5X7 153 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 ANKRD20A8PQ5CZ79 823 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 MANEALQ5VSG8 457 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 NADSYN1Q6IA69 706 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 HTR3DQ70Z44 454 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 ZNF683Q8IZ20 524 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 RNF157Q96PX1 679 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 EPAS1Q99814 870 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 L2HGDHQ9H9P8 463 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 SMARCAL1Q9NZC9 954 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 CD207Q9UJ71 328 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 STOML2Q9UJZ1 356 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 LSM7Q9UK45 103 aaKnown RBP18.69■□□□□ 0.58
CLPX-203ENST00000558958 BRWD1Q9NSI6 2320 aa18.69■□□□□ 0.58
CLPX-203ENST00000558958 PDE2AO00408 941 aaPredicted RBP18.68■□□□□ 0.58
CLPX-203ENST00000558958 EEF2KO00418 725 aaKnown RBP18.68■□□□□ 0.58
CLPX-203ENST00000558958 HTR7P34969 479 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 ADCY2Q08462 1091 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 KLF1Q13351 362 aaPredicted RBP18.68■□□□□ 0.58
CLPX-203ENST00000558958 AUHQ13825 339 aaKnown RBP18.68■□□□□ 0.58
CLPX-203ENST00000558958 CLUL1Q15846 466 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 FAM133BQ5BKY9 247 aaKnown RBP18.68■□□□□ 0.58
CLPX-203ENST00000558958 CCDC181Q5TID7 509 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 RFX8Q6ZV50 586 aa18.68■□□□□ 0.58
CLPX-203ENST00000558958 C14orf80Q86SX3 495 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 318.1 ms