RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 ARHGAP10A1A4S6 786 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 SYNCRIPO60506 623 aaKnown RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 ATP2C2O75185 946 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 PRPF6O94906 941 aaKnown RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 RTN3O95197 1032 aaPredicted RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 GJB6O95452 261 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 CST3P01034 146 aaPredicted RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 KRT19P08727 400 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 RARGP13631 454 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 PDIA4P13667 645 aaKnown RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 BDNFP23560 247 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 ANXA13P27216 316 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 GRIK1P39086 918 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 GRIA2P42262 883 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 TUBP50607 506 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 POLE2P56282 527 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 CLDN10P78369 228 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 AMPD3Q01432 767 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 RESTQ13127 1097 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 DHCR24Q15392 516 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 EGFLAMQ63HQ2 1017 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 SCARA3Q6AZY7 606 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 RHBDF2Q6PJF5 856 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 NUDT18Q6ZVK8 323 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 SCN4BQ8IWT1 228 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 MCEMP1Q8IX19 187 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 NUP93Q8N1F7 819 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 STKLD1Q8NE28 680 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 TTC16Q8NEE8 873 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 OR5B17Q8NGF7 314 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 MYLPFQ96A32 169 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 LURAP1Q96LR2 239 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 SLITRK1Q96PX8 696 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 MTMR12Q9C0I1 747 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 ELOVL4Q9GZR5 314 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 UPF2Q9HAU5 1272 aaKnown RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 TRPC7Q9HCX4 862 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 OSGEPQ9NPF4 335 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 ZNF71Q9NQZ8 489 aaPredicted RBP8.1□□□□□ -1.11
PCAT29-202ENST00000558941 TBC1D7Q9P0N9 293 aa8.1□□□□□ -1.11
PCAT29-202ENST00000558941 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 GOLGA8IPA6NC78 632 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 GOLGA8JA6NMD2 632 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 TGFB1I1O43294 461 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 HNRNPRO43390 633 aaKnown RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 PPP6R2O75170 966 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 APODP05090 189 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ZDHHC11BP0C7U3 371 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 IDEP14735 1019 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 PTPN1P18031 435 aaKnown RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 SYT1P21579 422 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 EPHA8P29322 1005 aaPredicted RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 HOXD13P35453 343 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 STAT6P42226 847 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 NASPP49321 788 aaPredicted RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 AP3M2P53677 418 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 USP46P62068 366 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 GAD2Q05329 585 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 EHHADHQ08426 723 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 BNIP3Q12983 259 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 PSMD6Q15008 389 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 E2F4Q16254 413 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ZXDCQ2QGD7 858 aaPredicted RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 KIAA1324Q6UXG2 1013 aaKnown RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 TRMT11Q7Z4G4 463 aaKnown RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 FILIP1Q7Z7B0 1213 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ETFBKMTQ8IXQ9 262 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ZNF276Q8N554 614 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 SPATA3Q8NHX4 192 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 CLIC6Q96NY7 704 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ELF4Q99607 663 aaPredicted RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 GABRG3Q99928 467 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 C7orf25Q9BPX7 421 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 TRIM9Q9C026 710 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 PCIF1Q9H4Z3 704 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 MAGEF1Q9HAY2 307 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ITM2CQ9NQX7 267 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ARHGEF4Q9NR80 690 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ERRFI1Q9UJM3 462 aaPredicted RBP8.09□□□□□ -1.11
PCAT29-202ENST00000558941 ACANP16112 2415 aa8.09□□□□□ -1.11
PCAT29-202ENST00000558941 NSD1Q96L73 2696 aaPredicted RBP8.08□□□□□ -1.12
PCAT29-202ENST00000558941 PTPRJQ12913 1337 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 PVALEFA0A1B0GWK0 134 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 F8VP50 259 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 TRIM24O15164 1050 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 HOXC11O43248 304 aaPredicted RBP8.08□□□□□ -1.12
PCAT29-202ENST00000558941 HCRTO43612 131 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 OPA1O60313 960 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 ADH1CP00326 375 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 WNT1P04628 370 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 ITGAVP06756 1048 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 PDGFRBP09619 1106 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 YWHAQP27348 245 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 NTSR1P30989 418 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 CYP27A1Q02318 531 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 TAF10Q12962 218 aa8.08□□□□□ -1.12
PCAT29-202ENST00000558941 SNRNP35Q16560 246 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms