RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 WDTC1Q8N5D0 677 aa17.69■□□□□ 0.42
LRRC28-210ENST00000558879 DDX1Q92499 740 aaKnown RBP17.69■□□□□ 0.42
LRRC28-210ENST00000558879 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
LRRC28-210ENST00000558879 TUBGCP2Q9BSJ2 902 aa17.69■□□□□ 0.42
LRRC28-210ENST00000558879 NDST4Q9H3R1 872 aa17.69■□□□□ 0.42
LRRC28-210ENST00000558879 POPDC2Q9HBU9 364 aa17.69■□□□□ 0.42
LRRC28-210ENST00000558879 USP36Q9P275 1121 aaKnown RBP17.69■□□□□ 0.42
LRRC28-210ENST00000558879 PLXNA2O75051 1894 aa17.69■□□□□ 0.42
LRRC28-210ENST00000558879 PRKCHP24723 683 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 HOXD12P35452 270 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 DPP6P42658 865 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 SLC11A2P49281 568 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 COPAP53621 1224 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 STARD3Q14849 445 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
LRRC28-210ENST00000558879 PPM1JQ5JR12 505 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 SYPL2Q5VXT5 272 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 IL31Q6EBC2 164 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 RFWD3Q6PCD5 774 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 ARMCX6Q7L4S7 300 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 ADIPOR2Q86V24 386 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 SYT12Q8IV01 421 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 AHI1Q8N157 1196 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 SORCS1Q8WY21 1168 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 PIGKQ92643 395 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 ERLEC1Q96DZ1 483 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 LMLNQ96KR4 655 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 CPXM1Q96SM3 734 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 CIPCQ9C0C6 399 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 MKRN2Q9H000 416 aaKnown RBP17.68■□□□□ 0.42
LRRC28-210ENST00000558879 TMEM74BQ9NUR3 256 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 ABCB8Q9NUT2 735 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 GGA2Q9UJY4 613 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 PILRBQ9UKJ0 227 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 CYP8B1Q9UNU6 501 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 ATXN2Q99700 1313 aaKnown RBP17.68■□□□□ 0.42
LRRC28-210ENST00000558879 PCNX2A6NKB5 2137 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 CHD5Q8TDI0 1954 aa17.68■□□□□ 0.42
LRRC28-210ENST00000558879 GOLGA6L7A0A1B0GV03 622 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 KHNYNO15037 678 aaKnown RBP17.67■□□□□ 0.42
LRRC28-210ENST00000558879 MAP3K13O43283 966 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 TIMM44O43615 452 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 ADRB1P08588 477 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 PABPC1P11940 636 aaKnown RBP17.67■□□□□ 0.42
LRRC28-210ENST00000558879 RPL6Q02878 288 aaKnown RBP17.67■□□□□ 0.42
LRRC28-210ENST00000558879 VWA3BQ502W6 1294 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 RBM43Q6ZSC3 357 aaKnown RBP17.67■□□□□ 0.42
LRRC28-210ENST00000558879 CHST9Q7L1S5 443 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 SLC41A1Q8IVJ1 513 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 ADAM32Q8TC27 787 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 MYEOVQ96EZ4 313 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 LHX5Q9H2C1 402 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 TMEM245Q9H330 911 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 DNAJC12Q9UKB3 198 aa17.67■□□□□ 0.42
LRRC28-210ENST00000558879 CDX4O14627 284 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 ZBTB24O43167 697 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 TBL1XO60907 577 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 IGLV3-19P01714 112 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 GLI1P08151 1106 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 PNMA6AP0CW24 399 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 PRKCSHP14314 528 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 ITPKAP23677 461 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 CD70P32970 193 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 CLCN1P35523 988 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 USP8P40818 1118 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 YWHAZP63104 245 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 PITX1P78337 314 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 ZNF33AQ06730 810 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 KCNMA1Q12791 1236 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 CAMK2GQ13555 558 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 PTPRNQ16849 979 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 HSP90AA4PQ58FG1 418 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 SLC23A3Q6PIS1 610 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 KIAA1324Q6UXG2 1013 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 SERPINA13PQ6UXR4 307 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 FAM71AQ8IYT1 594 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 ZNF557Q8N988 423 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 HJURPQ8NCD3 748 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 C1orf131Q8NDD1 294 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 SLC2A13Q96QE2 648 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 LSM14BQ9BX40 385 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 NUCKS1Q9H1E3 243 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 PRDM16Q9HAZ2 1276 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 SAMSN1Q9NSI8 373 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 ASNSD1Q9NWL6 643 aa17.66■□□□□ 0.42
LRRC28-210ENST00000558879 XPO7Q9UIA9 1087 aaKnown RBP17.66■□□□□ 0.42
LRRC28-210ENST00000558879 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 FOXN3O00409 490 aaPredicted RBP17.65■□□□□ 0.42
LRRC28-210ENST00000558879 CAPN9O14815 690 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 TRUB2O95900 331 aaKnown RBP17.65■□□□□ 0.42
LRRC28-210ENST00000558879 EEF1GP26641 437 aaKnown RBP17.65■□□□□ 0.42
LRRC28-210ENST00000558879 IRX4P78413 519 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 PTK2Q05397 1052 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 PTPN20Q4JDL3 420 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 TRIM61Q5EBN2 209 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 MS4A13Q5J8X5 152 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 MBLAC2Q68D91 279 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 OLFML1Q6UWY5 402 aa17.65■□□□□ 0.42
LRRC28-210ENST00000558879 SLC47A2Q86VL8 602 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms