RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TMEM160Q9NX00 188 aa4.95□□□□□ -1.62
CASC4-206ENST00000558847 TFCP2L1Q9NZI6 479 aa4.95□□□□□ -1.62
CASC4-206ENST00000558847 LRIT1Q9P2V4 623 aa4.95□□□□□ -1.62
CASC4-206ENST00000558847 KCND3Q9UK17 655 aa4.95□□□□□ -1.62
CASC4-206ENST00000558847 TBX20Q9UMR3 447 aa4.95□□□□□ -1.62
CASC4-206ENST00000558847 FER1L4A9Z1Z3 1794 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 FAM90A20PA6NIJ5 464 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 A6NLC8 198 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 TTC34A8MYJ7 566 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 GUCY1B2O75343 617 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 ALDOAP04075 364 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 SLC3A2P08195 630 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 TMIGD3P0DMS9 266 aaPredicted RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 NR2F6P10588 404 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 CTGFP29279 349 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 PSMC2P35998 433 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 MPP1Q00013 466 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 RNASELQ05823 741 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 TBL3Q12788 808 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 DLGAP5Q15398 846 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 AARS2Q5JTZ9 985 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 STRIP1Q5VSL9 837 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 ATG16L1Q676U5 607 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 ANKRD40Q6AI12 368 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 TMEM88Q6PEY1 159 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 SLC44A3Q8N4M1 653 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 ADPRHL1Q8NDY3 354 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 NPIPB3Q92617 1050 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 HTRA1Q92743 480 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 HDAC2Q92769 488 aaKnown RBP4.94□□□□□ -1.62
CASC4-206ENST00000558847 NPAS1Q99742 590 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 REEP2Q9BRK0 252 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 FSD1LQ9BXM9 530 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 GPR63Q9BZJ6 419 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 ABHD16BQ9H3Z7 469 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 SYNPO2LQ9H987 977 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 DUSP22Q9NRW4 184 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 VPS45Q9NRW7 570 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 DKK3Q9UBP4 350 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 SWAP70Q9UH65 585 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 DNAJC16Q9Y2G8 782 aa4.94□□□□□ -1.62
CASC4-206ENST00000558847 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 MASP2O00187 686 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 AP4M1O00189 453 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 ESRRBO95718 433 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 JUPP14923 745 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 CYP2C18P33260 490 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 MCM5P33992 734 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 MPLP40238 635 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 PNPLA4P41247 253 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 GRIA3P42263 894 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 EEFSECP57772 596 aaKnown RBP4.93□□□□□ -1.62
CASC4-206ENST00000558847 RPL15P61313 204 aaKnown RBP4.93□□□□□ -1.62
CASC4-206ENST00000558847 DCTN1Q14203 1278 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 GRHL2Q6ISB3 625 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 ANO7Q6IWH7 933 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 TMED8Q6PL24 325 aaPredicted RBP4.93□□□□□ -1.62
CASC4-206ENST00000558847 LRRC8DQ7L1W4 858 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 TCP11L2Q8N4U5 519 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 C12orf76Q8N812 135 aaPredicted RBP4.93□□□□□ -1.62
CASC4-206ENST00000558847 SRFBP1Q8NEF9 429 aaKnown RBP4.93□□□□□ -1.62
CASC4-206ENST00000558847 TBC1D5Q92609 795 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 CAVIN3Q969G5 261 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 SH3KBP1Q96B97 665 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 HVCN1Q96D96 273 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 MECRQ9BV79 373 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 TERF2IPQ9NYB0 399 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 GGA3Q9NZ52 723 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 TRPC5Q9UL62 973 aaPredicted RBP4.93□□□□□ -1.62
CASC4-206ENST00000558847 ADAMTS5Q9UNA0 930 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 AFG3L2Q9Y4W6 797 aa4.93□□□□□ -1.62
CASC4-206ENST00000558847 ANP32CO43423 234 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 HSP90AA1P07900 732 aaKnown RBP4.92□□□□□ -1.62
CASC4-206ENST00000558847 TNFAIP3P21580 790 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 GPD2P43304 727 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 DIO1P49895 249 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 CCR5P51681 352 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 JAK3P52333 1124 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 RCAN1P53805 252 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 TAS2R50P59544 299 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 SIM2Q14190 667 aaPredicted RBP4.92□□□□□ -1.62
CASC4-206ENST00000558847 GPR162Q16538 588 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 FAM153CQ494X1 144 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 GLE1Q53GS7 698 aaKnown RBP4.92□□□□□ -1.62
CASC4-206ENST00000558847 WDR45BQ5MNZ6 344 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 DENND1BQ6P3S1 775 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 CLEC4GQ6UXB4 293 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 DPY19L3Q6ZPD9 716 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 ACTRT2Q8TDY3 377 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 TFAP2BQ92481 460 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 PPP1R10Q96QC0 940 aaKnown RBP4.92□□□□□ -1.62
CASC4-206ENST00000558847 CDCP1Q9H5V8 836 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 IRAK4Q9NWZ3 460 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 DLL3Q9NYJ7 618 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 FBXO2Q9UK22 296 aaPredicted RBP4.92□□□□□ -1.62
CASC4-206ENST00000558847 SLC12A4Q9UP95 1085 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 GDAQ9Y2T3 454 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 SPATA31A1Q5TZJ5 1347 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 SALL3Q9BXA9 1300 aa4.92□□□□□ -1.62
CASC4-206ENST00000558847 CYP3A7-CYP3A51PA0A087WV96 503 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms