RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.27
SMAD3-207ENST00000558763 AUTS2Q8WXX7 1259 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 C9orf72Q96LT7 481 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 QKIQ96PU8 341 aaKnown RBP eCLIP13.4□□□□□ -0.27
SMAD3-207ENST00000558763 NKX2-4Q9H2Z4 354 aa13.4□□□□□ -0.27
SMAD3-207ENST00000558763 ABI2Q9NYB9 513 aaPredicted RBP13.4□□□□□ -0.27
SMAD3-207ENST00000558763 NUP205Q92621 2012 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 H7C0C1 242 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 VAV1P15498 845 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 CA8P35219 290 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 MAGEA4P43358 317 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 ATP5OP48047 213 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 NR2C2P49116 596 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 GLUD2P49448 558 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 XRCC4Q13426 336 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 SLC45A4Q5BKX6 768 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
SMAD3-207ENST00000558763 PGM2Q96G03 612 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 HERC2P3Q9BVR0 1158 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 PHACTR1Q9C0D0 580 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 NMUR1Q9HB89 426 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 MSRAQ9UJ68 235 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 RWDD3Q9Y3V2 267 aa13.39□□□□□ -0.27
SMAD3-207ENST00000558763 CFAP69A5D8W1 941 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 E7ESA3 106 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 KCNN4O15554 427 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 BANF1O75531 89 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 URODP06132 367 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ZFXP17010 805 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 NR1D1P20393 614 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 GRIK1P39086 918 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ARL4AP40617 200 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ARPP19P56211 112 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 RAB30Q15771 203 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 PSMD5Q16401 504 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 NFE2Q16621 373 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 EFHC2Q5JST6 749 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 SDHAF4Q5VUM1 108 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 PPP2R2DQ66LE6 453 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 VSTM1Q6UX27 236 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 RFX8Q6ZV50 586 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ANKS3Q6ZW76 656 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 DCP1BQ8IZD4 617 aaKnown RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 CCDC33Q8N5R6 958 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 C8orf48Q96LL4 319 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 TGS1Q96RS0 853 aaKnown RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 EURLQ9NYK6 297 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 IL37Q9NZH6 218 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 SLC12A6Q9UHW9 1150 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 GOLGA6L10A6NI86 522 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ALOX15BO15296 676 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 IRAK2O43187 625 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 TCEA3O75764 348 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ABHD2P08910 425 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 MAGEA6P43360 314 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 MAGEA11P43364 429 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 USP46P62068 366 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 CBLBQ13191 982 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 AUHQ13825 339 aaKnown RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 FNBP1LQ5T0N5 605 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 PCGF5Q86SE9 256 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 TP53INP2Q8IXH6 220 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 TAB3Q8N5C8 712 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 PRDM16Q9HAZ2 1276 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 SAYSD1Q9NPB0 183 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMAD3-207ENST00000558763 CDY1Q9Y6F8 540 aa13.38□□□□□ -0.27
SMAD3-207ENST00000558763 FAM92AA1XBS5 289 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 OR6C75A6NL08 312 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 H3BRJ5 948 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 GOLGA8MH3BSY2 632 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 NDC80O14777 642 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 F9P00740 461 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 CPB1P15086 417 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 DSG1Q02413 1049 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 PRKD1Q15139 912 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-207ENST00000558763 DDR2Q16832 855 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 CDKL3Q8IVW4 592 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-207ENST00000558763 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 PGLYRP2Q96PD5 576 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 ZBP1Q9H171 429 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 SLC28A3Q9HAS3 691 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 NOVA2Q9UNW9 492 aaKnown RBP13.37□□□□□ -0.27
SMAD3-207ENST00000558763 SNX10Q9Y5X0 201 aa13.37□□□□□ -0.27
SMAD3-207ENST00000558763 CLUHO75153 1309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms