RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PRPHP41219 470 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 CCR10P46092 362 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 RXRGP48443 463 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 CASP5P51878 434 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 PPP2CBP62714 309 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 PPP2CAP67775 309 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 DAB2P98082 770 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
SMAD3-206ENST00000558739 TTC31Q49AM3 519 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-206ENST00000558739 ZNF720Q7Z2F6 126 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 FUKQ8N0W3 1084 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 GANCQ8TET4 914 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 ATXN7L3BQ96GX2 97 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 SERAC1Q96JX3 654 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 SLC46A1Q96NT5 459 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 MED10Q9BTT4 135 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 STRA6Q9BX79 667 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 EPN3Q9H201 632 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 PABPC3Q9H361 631 aaKnown RBP12.46□□□□□ -0.41
SMAD3-206ENST00000558739 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.41
SMAD3-206ENST00000558739 FBXL12Q9NXK8 326 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 CA5BQ9Y2D0 317 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 U3KQA8 63 aa12.46□□□□□ -0.41
SMAD3-206ENST00000558739 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 A8MXQ7 604 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 MID1O15344 667 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 TACC1O75410 805 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 AP1G2O75843 785 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 ATP5C1P36542 298 aaKnown RBP12.45□□□□□ -0.42
SMAD3-206ENST00000558739 E2F1Q01094 437 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 ARID5AQ03989 594 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 SERINC3Q13530 473 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 ISXQ2M1V0 245 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 C10orf120Q5SQS8 335 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 FOXR1Q6PIV2 292 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 FBXO18Q8NFZ0 1043 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 NEUROG2Q9H2A3 272 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 ST6GALNAC4Q9H4F1 302 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
SMAD3-206ENST00000558739 TLR8Q9NR97 1041 aaKnown RBP12.45□□□□□ -0.42
SMAD3-206ENST00000558739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMAD3-206ENST00000558739 AKAP9Q99996 3911 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 CDRT15L2A8MXV6 281 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 CST3P01034 146 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 RARGP13631 454 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 HOXD9P28356 352 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 CORO1AP31146 461 aaKnown RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 GOLGA8FQ08AF8 430 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 GOLGA8DPQ0D2H9 430 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 ZNF211Q13398 564 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 POSTNQ15063 836 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 TGIF1Q15583 401 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 SKIDA1Q1XH10 827 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 ZNF776Q68DI1 518 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 IGF2-ASQ6U949 168 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 DYMQ7RTS9 669 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 ADIPOR2Q86V24 386 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 PTRH1Q86Y79 214 aaKnown RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 CBWD2Q8IUF1 395 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 RAD54LQ92698 747 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 SMARCD1Q96GM5 515 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 CCNL2Q96S94 520 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 ARHGAP9Q9BRR9 750 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 HMGXB4Q9UGU5 601 aa12.44□□□□□ -0.42
SMAD3-206ENST00000558739 AGO1Q9UL18 857 aaKnown RBP12.44□□□□□ -0.42
SMAD3-206ENST00000558739 DNHD1Q96M86 4753 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 CSMD2Q7Z408 3487 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 GIMD1P0DJR0 217 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 TGM2P21980 687 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 RBMS1P29558 406 aaKnown RBP12.43□□□□□ -0.42
SMAD3-206ENST00000558739 CYP4F2P78329 520 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 ZBTB16Q05516 673 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 WDR72Q3MJ13 1102 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 SCARA5Q6ZMJ2 495 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 CHST9Q7L1S5 443 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 TRAPPC11Q7Z392 1133 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 SCD5Q86SK9 330 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 DENND1CQ8IV53 801 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 OR2T34Q8NGX1 318 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 WFDC5Q8TCV5 224 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 SKA1Q96BD8 255 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 RSPH9Q9H1X1 276 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-206ENST00000558739 ERVMER34-1Q9H9K5 563 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 ABCB8Q9NUT2 735 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 SEPT3Q9UH03 358 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 ATXN7L1Q9ULK2 861 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-206ENST00000558739 APCP25054 2843 aa12.43□□□□□ -0.42
SMAD3-206ENST00000558739 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 SIN3BO75182 1162 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
SMAD3-206ENST00000558739 TNNC2P02585 160 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 CKMT1AP12532 417 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 WT1P19544 449 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-206ENST00000558739 PLA2G4AP47712 749 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 METAP1P53582 386 aa12.42□□□□□ -0.42
SMAD3-206ENST00000558739 ADPRHP54922 357 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms