RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 UBR7Q8N806 425 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 PIGKQ92643 395 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 DHTKD1Q96HY7 919 aaPredicted RBP8.43□□□□□ -1.06
TRAF3-205ENST00000558700 GABRG3Q99928 467 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 LSM14BQ9BX40 385 aaKnown RBP8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ULBP1Q9BZM6 244 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 CACNA2D2Q9NY47 1150 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 PLK2Q9NYY3 685 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ANGPTL2Q9UKU9 493 aa8.43□□□□□ -1.06
TRAF3-205ENST00000558700 ATXN2Q99700 1313 aaKnown RBP8.43□□□□□ -1.06
TRAF3-205ENST00000558700 DNAH14Q0VDD8 3507 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 CNOT1A5YKK6 2376 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 A0A1W2PQF6 199 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 C4orf47A7E2U8 309 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PATE3B3GLJ2 98 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 TM4SF5O14894 197 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PMM2O15305 246 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 P4HA2O15460 535 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 KCNK5O95279 499 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 LATS1O95835 1130 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 KLKB1P03952 638 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PAEPP09466 180 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PMLP29590 882 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PTGER3P43115 390 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 SCTRP47872 440 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 HARS2P49590 506 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 NOVA1P51513 510 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 LRMPQ12912 555 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 STILQ15468 1287 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PM20D1Q6GTS8 502 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 KLHL10Q6JEL2 608 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PSAPL1Q6NUJ1 521 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 TMEM270Q6UE05 265 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 KIAA1324Q6UXG2 1013 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 CAPN12Q6ZSI9 719 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 TOGARAM2Q6ZUX3 1019 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 DENND1CQ8IV53 801 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 TMEFF1Q8IYR6 380 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 SCML4Q8N228 414 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PPM1KQ8N3J5 372 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 RNF139Q8WU17 664 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 KCTD13Q8WZ19 329 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 ERCC4Q92889 916 aaPredicted RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 CNTNAP3BQ96NU0 1288 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 ACOX2Q99424 681 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 RBCK1Q9BYM8 510 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 SLC2A11Q9BYW1 496 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 CNTNAP3Q9BZ76 1288 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 CNGB3Q9NQW8 809 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 MBD1Q9UIS9 605 aaPredicted RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 FBXO10Q9UK96 956 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 MAN1B1Q9UKM7 699 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 AGO1Q9UL18 857 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 HCN2Q9UL51 889 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 KIAA1257Q9ULG3 409 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 CTNND2Q9UQB3 1225 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 HBS1LQ9Y450 684 aaKnown RBP8.42□□□□□ -1.06
TRAF3-205ENST00000558700 PCDH15Q96QU1 1955 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 ACACBO00763 2458 aa8.42□□□□□ -1.06
TRAF3-205ENST00000558700 NYNRINQ9P2P1 1898 aaKnown RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 IGHV1OR15-9A0A0B4J2B8 117 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TMEM229AB2RXF0 380 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 M0QYV0 167 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TULP2O00295 520 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 SYNCRIPO60506 623 aaKnown RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 GNA14O95837 355 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 CFIP05156 583 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 CISD3P0C7P0 127 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 ITPKAP23677 461 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF132P52740 706 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 ATXN3P54252 364 aaPredicted RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 MFAP3P55082 362 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 SHC2P98077 582 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 GCNT1Q02742 428 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 ARID5AQ03989 594 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 ZNF252P-AS1Q0IIN9 211 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 PAK1Q13153 545 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TRIP4Q15650 581 aaPredicted RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 DUOXA1Q1HG43 343 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TSNAXIP1Q2TAA8 658 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 MPPE1Q53F39 396 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 TTI2Q6NXR4 508 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 C16orf46Q6P387 395 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 SLC23A3Q6PIS1 610 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 LCLAT1Q6UWP7 414 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 BHLHA9Q7RTU4 235 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 FMNL3Q8IVF7 1028 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 FAM217AQ8IXS0 508 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 RBBP8NLQ8NC74 664 aaPredicted RBP8.41□□□□□ -1.06
TRAF3-205ENST00000558700 CEP76Q8TAP6 659 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 WFIKKN2Q8TEU8 576 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 DDI1Q8WTU0 396 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 NELFBQ8WX92 580 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 IRGQQ8WZA9 623 aa8.41□□□□□ -1.06
TRAF3-205ENST00000558700 GOLGA1Q92805 767 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms