RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 FAM183BPQ6ZVS7 135 aa8.81□□□□□ -1
TPM1-213ENST00000558400 SND1Q7KZF4 910 aaKnown RBP eCLIP8.81□□□□□ -1
TPM1-213ENST00000558400 LUZP1Q86V48 1076 aa8.81□□□□□ -1
TPM1-213ENST00000558400 C12orf40Q86WS4 652 aa8.81□□□□□ -1
TPM1-213ENST00000558400 DEFB106AQ8N104 65 aa8.81□□□□□ -1
TPM1-213ENST00000558400 PHTF2Q8N3S3 785 aa8.81□□□□□ -1
TPM1-213ENST00000558400 CPA5Q8WXQ8 436 aa8.81□□□□□ -1
TPM1-213ENST00000558400 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
TPM1-213ENST00000558400 RNF34Q969K3 372 aa8.81□□□□□ -1
TPM1-213ENST00000558400 PPP1R9BQ96SB3 815 aa8.81□□□□□ -1
TPM1-213ENST00000558400 POLMQ9NP87 494 aaPredicted RBP8.81□□□□□ -1
TPM1-213ENST00000558400 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.81□□□□□ -1
TPM1-213ENST00000558400 NOCTQ9UK39 431 aaKnown RBP8.81□□□□□ -1
TPM1-213ENST00000558400 RAB23Q9ULC3 237 aa8.81□□□□□ -1
TPM1-213ENST00000558400 MMP17Q9ULZ9 603 aa8.81□□□□□ -1
TPM1-213ENST00000558400 MIA3Q5JRA6 1907 aa8.8□□□□□ -1
TPM1-213ENST00000558400 KCNU1A8MYU2 1149 aa8.8□□□□□ -1
TPM1-213ENST00000558400 MSI1O43347 362 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 DAB1O75553 588 aa8.8□□□□□ -1
TPM1-213ENST00000558400 APBB3O95704 486 aa8.8□□□□□ -1
TPM1-213ENST00000558400 IGLV3-25P01717 112 aa8.8□□□□□ -1
TPM1-213ENST00000558400 HNRNPLP14866 589 aaKnown RBP eCLIP8.8□□□□□ -1
TPM1-213ENST00000558400 MMP8P22894 467 aa8.8□□□□□ -1
TPM1-213ENST00000558400 NTSR1P30989 418 aa8.8□□□□□ -1
TPM1-213ENST00000558400 NSFP46459 744 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 OXCT1P55809 520 aa8.8□□□□□ -1
TPM1-213ENST00000558400 RNASE9P60153 205 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 NOMO3P69849 1222 aa8.8□□□□□ -1
TPM1-213ENST00000558400 FMO1Q01740 532 aa8.8□□□□□ -1
TPM1-213ENST00000558400 ARID5AQ03989 594 aa8.8□□□□□ -1
TPM1-213ENST00000558400 KDSRQ06136 332 aa8.8□□□□□ -1
TPM1-213ENST00000558400 EIF4EBP2Q13542 120 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 BYSLQ13895 437 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 COL9A2Q14055 689 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 TAF5Q15542 800 aa8.8□□□□□ -1
TPM1-213ENST00000558400 CRY1Q16526 586 aa8.8□□□□□ -1
TPM1-213ENST00000558400 SLC25A52Q3SY17 297 aa8.8□□□□□ -1
TPM1-213ENST00000558400 ZC3H12AQ5D1E8 599 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 EMC10Q5UCC4 262 aa8.8□□□□□ -1
TPM1-213ENST00000558400 NAA35Q5VZE5 725 aa8.8□□□□□ -1
TPM1-213ENST00000558400 C11orf74Q86VG3 221 aa8.8□□□□□ -1
TPM1-213ENST00000558400 WDR5BQ86VZ2 330 aa8.8□□□□□ -1
TPM1-213ENST00000558400 XYLT1Q86Y38 959 aa8.8□□□□□ -1
TPM1-213ENST00000558400 ZNF513Q8N8E2 541 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 IL17RCQ8NAC3 791 aa8.8□□□□□ -1
TPM1-213ENST00000558400 TXNDC5Q8NBS9 432 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 HJURPQ8NCD3 748 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 TSTD1Q8NFU3 115 aa8.8□□□□□ -1
TPM1-213ENST00000558400 WFIKKN2Q8TEU8 576 aa8.8□□□□□ -1
TPM1-213ENST00000558400 BHMTQ93088 406 aa8.8□□□□□ -1
TPM1-213ENST00000558400 NT5C3BQ969T7 300 aa8.8□□□□□ -1
TPM1-213ENST00000558400 PGAP3Q96FM1 320 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 VCPIP1Q96JH7 1222 aa8.8□□□□□ -1
TPM1-213ENST00000558400 FCRL2Q96LA5 508 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 NAP1L5Q96NT1 182 aaPredicted RBP8.8□□□□□ -1
TPM1-213ENST00000558400 AGPAT1Q99943 283 aa8.8□□□□□ -1
TPM1-213ENST00000558400 WDCPQ9H6R7 721 aa8.8□□□□□ -1
TPM1-213ENST00000558400 DDIT4Q9NX09 232 aa8.8□□□□□ -1
TPM1-213ENST00000558400 ELOVL2Q9NXB9 296 aa8.8□□□□□ -1
TPM1-213ENST00000558400 PLK2Q9NYY3 685 aa8.8□□□□□ -1
TPM1-213ENST00000558400 AIPL1Q9NZN9 384 aa8.8□□□□□ -1
TPM1-213ENST00000558400 TJP2Q9UDY2 1190 aa8.8□□□□□ -1
TPM1-213ENST00000558400 PLA2G4CQ9UP65 541 aa8.8□□□□□ -1
TPM1-213ENST00000558400 BZW2Q9Y6E2 419 aaKnown RBP8.8□□□□□ -1
TPM1-213ENST00000558400 R4GN57 208 aa8.8□□□□□ -1
TPM1-213ENST00000558400 PATJQ8NI35 1801 aa8.8□□□□□ -1
TPM1-213ENST00000558400 COL4A2P08572 1712 aa8.8□□□□□ -1
TPM1-213ENST00000558400 KIF26AQ9ULI4 1882 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 M0QYT0 321 aa8.79□□□□□ -1
TPM1-213ENST00000558400 AXIN1O15169 862 aa8.79□□□□□ -1
TPM1-213ENST00000558400 TSPAN3O60637 253 aa8.79□□□□□ -1
TPM1-213ENST00000558400 GRAP2O75791 330 aa8.79□□□□□ -1
TPM1-213ENST00000558400 KLF8O95600 359 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 CALB1P05937 261 aa8.79□□□□□ -1
TPM1-213ENST00000558400 ATP5BP06576 529 aaKnown RBP8.79□□□□□ -1
TPM1-213ENST00000558400 UNGP13051 313 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 CHRNB2P17787 502 aa8.79□□□□□ -1
TPM1-213ENST00000558400 TNFAIP3P21580 790 aa8.79□□□□□ -1
TPM1-213ENST00000558400 FNTBP49356 437 aa8.79□□□□□ -1
TPM1-213ENST00000558400 SEC13P55735 322 aa8.79□□□□□ -1
TPM1-213ENST00000558400 SIM2Q14190 667 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 USP39Q53GS9 565 aaKnown RBP8.79□□□□□ -1
TPM1-213ENST00000558400 MS4A13Q5J8X5 152 aa8.79□□□□□ -1
TPM1-213ENST00000558400 BRMS1LQ5PSV4 323 aa8.79□□□□□ -1
TPM1-213ENST00000558400 FAM102AQ5T9C2 384 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 TTC39BQ5VTQ0 682 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 SFMBT2Q5VUG0 894 aa8.79□□□□□ -1
TPM1-213ENST00000558400 HEATR6Q6AI08 1181 aaKnown RBP8.79□□□□□ -1
TPM1-213ENST00000558400 PKN3Q6P5Z2 889 aa8.79□□□□□ -1
TPM1-213ENST00000558400 IRF2BP2Q7Z5L9 587 aa8.79□□□□□ -1
TPM1-213ENST00000558400 ANKS1BQ7Z6G8 1248 aa8.79□□□□□ -1
TPM1-213ENST00000558400 TAC4Q86UU9 113 aa8.79□□□□□ -1
TPM1-213ENST00000558400 PHF13Q86YI8 300 aaPredicted RBP8.79□□□□□ -1
TPM1-213ENST00000558400 CHPFQ8IZ52 775 aa8.79□□□□□ -1
TPM1-213ENST00000558400 CCDC33Q8N5R6 958 aa8.79□□□□□ -1
TPM1-213ENST00000558400 ALLCQ8N6M5 410 aa8.79□□□□□ -1
TPM1-213ENST00000558400 GPR161Q8N6U8 529 aaKnown RBP8.79□□□□□ -1
TPM1-213ENST00000558400 FIBINQ8TAL6 211 aa8.79□□□□□ -1
TPM1-213ENST00000558400 ADAM32Q8TC27 787 aa8.79□□□□□ -1
TPM1-213ENST00000558400 SLC20A1Q8WUM9 679 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms