RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SREBF2Q12772 1141 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 CUL2Q13617 745 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 PDIA5Q14554 519 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 PPP1R14BQ96C90 147 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 STARD7Q9NQZ5 370 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 CLIC5Q9NZA1 410 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 PRKAB1Q9Y478 270 aa14.28□□□□□ -0.12
SPG11-210ENST00000558319 UBDO15205 165 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 ERCC2P18074 760 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 YWHAQP27348 245 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 ABCG1P45844 678 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 AHCYL2Q96HN2 611 aaKnown RBP14.27□□□□□ -0.12
SPG11-210ENST00000558319 EPB41L1Q9H4G0 881 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 ATXN2Q99700 1313 aaKnown RBP14.27□□□□□ -0.12
SPG11-210ENST00000558319 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 HBP1O60381 514 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 VPS26AO75436 327 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 RHOCP08134 193 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 RARGP13631 454 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 LBPP18428 481 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 RNF44Q7L0R7 432 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 POC5Q8NA72 575 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.12
SPG11-210ENST00000558319 PNMA5Q96PV4 448 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 HMG20AQ9NP66 347 aa14.27□□□□□ -0.12
SPG11-210ENST00000558319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.12
SPG11-210ENST00000558319 MGAT4DA6NG13 374 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 OPLAHO14841 1288 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
SPG11-210ENST00000558319 FCGR1AP12314 374 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
SPG11-210ENST00000558319 PRAMEF19Q5SWL8 479 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 PSMA8Q8TAA3 256 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 VPS33AQ96AX1 596 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 DISP1Q96F81 1524 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 MARK4Q96L34 752 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 QKIQ96PU8 341 aaKnown RBP eCLIP14.27□□□□□ -0.13
SPG11-210ENST00000558319 CDRT15Q96T59 188 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 BTBD3Q9Y2F9 522 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 C19orf81C9J6K1 198 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 H3BN98 237 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 ITGA3P26006 1051 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 BEX3Q00994 111 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 RGL4Q8IZJ4 473 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 SLC20A1Q8WUM9 679 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 FAR2Q96K12 515 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 ZNF184Q99676 751 aaPredicted RBP14.27□□□□□ -0.13
SPG11-210ENST00000558319 L2HGDHQ9H9P8 463 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 PON1P27169 355 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 EXOSC10Q01780 885 aaKnown RBP14.27□□□□□ -0.13
SPG11-210ENST00000558319 PLD1Q13393 1074 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 ITGA9Q13797 1035 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 PCNX4Q63HM2 1172 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 EFCAB3Q8N7B9 438 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 NETO2Q8NC67 525 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 RNASE11Q8TAA1 199 aaKnown RBP14.27□□□□□ -0.13
SPG11-210ENST00000558319 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 MIR1-1HGQ9H1L0 117 aa14.27□□□□□ -0.13
SPG11-210ENST00000558319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.27□□□□□ -0.137e-9■■■□□ 17.9
SPG11-210ENST00000558319 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 TP73O15350 636 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TSPAN19P0C672 248 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 NOS3P29474 1203 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 GRK3P35626 688 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 NFIAQ12857 509 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TSNQ15631 228 aaKnown RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 UGT3A1Q6NUS8 523 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 KIAA0408Q6ZU52 694 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TCP10LQ8TDR4 215 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 AGAP11Q8TF27 550 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 MRPS31Q92665 395 aaKnown RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 RRN3Q9NYV6 651 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 CCDC167Q9P0B6 97 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 URODP06132 367 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 FDFT1P37268 417 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 FASTKQ14296 549 aaKnown RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 CASP12Q6UXS9 341 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 RBM23Q86U06 439 aaKnown RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 C1orf50Q9BV19 199 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 TCF7L2Q9NQB0 619 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 EURLQ9NYK6 297 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 PACSIN3Q9UKS6 424 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 MAP3K4Q9Y6R4 1608 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 SDR42E2A6NKP2 422 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 JCHAINP01591 159 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 CYP2C8P10632 490 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 GUCA1AP43080 201 aaPredicted RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 CYP4F2P78329 520 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 CYP4F3Q08477 520 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 GRIK3Q13003 919 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 N4BP2L1Q5TBK1 243 aaPredicted RBP14.26□□□□□ -0.13
SPG11-210ENST00000558319 LINC00523Q86TU6 105 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 BDH2Q9BUT1 245 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 RIPK2O43353 540 aa14.26□□□□□ -0.13
SPG11-210ENST00000558319 GUCY1B2O75343 617 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms